RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.86
RTN3-204ENST00000354497 APOBEC1P41238 236 aaKnown RBP9.65□□□□□ -0.86
RTN3-204ENST00000354497 UBA52P62987 128 aaKnown RBP9.65□□□□□ -0.86
RTN3-204ENST00000354497 AANATQ16613 207 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 EXOSC6Q5RKV6 272 aaKnown RBP9.65□□□□□ -0.86
RTN3-204ENST00000354497 EPGNQ6UW88 154 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 OLIG3Q7RTU3 272 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 AAED1Q7RTV5 226 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 OVCH2Q7RTZ1 564 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 ABHD12BQ7Z5M8 362 aaPredicted RBP9.65□□□□□ -0.86
RTN3-204ENST00000354497 SLC22A9Q8IVM8 553 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 C22orf15Q8WYQ4 148 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 ST8SIA4Q92187 359 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 YIPF6Q96EC8 236 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 HYLS1Q96M11 299 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 TMEM68Q96MH6 324 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 GSTO2Q9H4Y5 243 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 OBP2BQ9NPH6 170 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 ESM1Q9NQ30 184 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 SIRT3Q9NTG7 399 aaPredicted RBP9.65□□□□□ -0.86
RTN3-204ENST00000354497 CYB5R1Q9UHQ9 305 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 HDGFL3Q9Y3E1 203 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 PTGDR2Q9Y5Y4 395 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 PEX16Q9Y5Y5 336 aa9.65□□□□□ -0.86
RTN3-204ENST00000354497 TRAV20A0A0B4J274 112 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 METTL15A6NJ78 407 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 NPIPB9F8W1W9 429 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 WNT9BO14905 357 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ANKRD28O15084 1053 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 PPIHO43447 177 aaKnown RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 DNPH1O43598 174 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 HPRP00739 348 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ARAFP10398 606 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ADRA2CP18825 462 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 SDC1P18827 310 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 FRKP42685 505 aaPredicted RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 CCT3P49368 545 aaKnown RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 KHKP50053 298 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 RPL38P63173 70 aaKnown RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 HGFACQ04756 655 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 DBPQ10586 325 aaPredicted RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 NEDD8Q15843 81 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ZNF404Q494X3 552 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 HSD17B12Q53GQ0 312 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 CYBRD1Q53TN4 286 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 DPP10Q8N608 796 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ZDHHC22Q8N966 263 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 POMGNT2Q8NAT1 580 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 PAPD5Q8NDF8 572 aaKnown RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 NUP37Q8NFH4 326 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 BPIFB6Q8NFQ5 453 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 OR4M1Q8NGD0 313 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 OR56A1Q8NGH5 318 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 OR5D16Q8NGK9 328 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 OR1K1Q8NGR3 316 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 PSMA8Q8TAA3 256 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 LRTOMTQ8WZ04 291 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 SLCO4A1Q96BD0 722 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 OR7D2Q96RA2 312 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 EBF4Q9BQW3 602 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ZNF442Q9H7R0 627 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 ZFAND3Q9H8U3 227 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 UNKLQ9H9P5 680 aaKnown RBP9.65□□□□□ -0.87
RTN3-204ENST00000354497 PLSCR3Q9NRY6 295 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 C1orf109Q9NX04 203 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 TMEM181Q9P2C4 612 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 FIS1Q9Y3D6 152 aa9.65□□□□□ -0.87
RTN3-204ENST00000354497 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 CENPVL1A0A0U1RR11 272 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 MPTX1A8MV57 137 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 ZNF99A8MXY4 864 aaPredicted RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 ZNF587BE7ETH6 402 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 I3L521 148 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 SOCS2O14508 198 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 TBX19O60806 448 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 CELA3BP08861 270 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 HKR1P10072 659 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 SPNP16150 400 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 EEF1B2P24534 225 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 S100PP25815 95 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 SOAT1P35610 550 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 POLR2IP36954 125 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 ERFP50548 548 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 SLC35A1P78382 337 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 NPRL3Q12980 569 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 SNTB2Q13425 540 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 IL18R1Q13478 541 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 MICAQ29983 383 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 MTX3Q5HYI7 312 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 SYT6Q5T7P8 510 aaPredicted RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 HIST2H2BDQ6DRA6 164 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 ZYG11AQ6WRX3 759 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 EIF3MQ7L2H7 374 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 TRIM46Q7Z4K8 759 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 C1QL2Q7Z5L3 287 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 OR5AK3PQ8NH89 298 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 PHF21AQ96BD5 680 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 L3HYPDHQ96EM0 354 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms