RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ZNF24P17028 368 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 IGFBP3P17936 291 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 FOLR3P41439 243 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 KIR3DL2P43630 455 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ZNF84P51523 738 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 AP2S1P53680 142 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 PSMA6P60900 246 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 IFITM2Q01629 132 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CD300CQ08708 224 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 VWA2Q5GFL6 755 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 C1orf100Q5SVJ3 147 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ZNF626Q68DY1 528 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SFTPA2Q8IWL1 248 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SLC25A45Q8N413 288 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PNLDC1Q8NA58 520 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 DTWD2Q8NBA8 298 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 DNAAF1Q8NEP3 725 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SLC26A10Q8NG04 563 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 IFI44Q8TCB0 444 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 RNF133Q8WVZ7 376 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MARVELD3Q96A59 401 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 TTTY10Q9BZA0 68 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 STRADBQ9C0K7 418 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ATG5Q9H1Y0 275 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 GALNT9Q9HCQ5 603 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MED11Q9P086 117 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 FBLN5Q9UBX5 448 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SLC22A13Q9Y226 551 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 KLHDC2Q9Y2U9 406 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 IGHV5-10-1A0A0J9YXX1 117 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 A0A1W2PQ72 361 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CPED1A4D0V7 1026 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PIN1P1O15428 100 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PAHP00439 452 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CD37P11049 281 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 BCKDHBP21953 392 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 DNASE1P24855 282 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MST1P26927 711 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PTH2RP49190 550 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SSR4P51571 173 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 DSCR4P56555 118 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 UBE2MP61081 183 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 CCL7P80098 99 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 C19orf57Q0VDD7 668 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SF3B4Q15427 424 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNF38-203ENST00000353739 FCN2Q15485 313 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 STK11Q15831 433 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PNLIPRP3Q17RR3 467 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PLPPR5Q32ZL2 321 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PCGF3Q3KNV8 242 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 FAHD2BQ6P2I3 314 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 POMZP3Q6PJE2 187 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 APOOLQ6UXV4 268 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 DOK3Q7L591 496 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 KANSL1Q7Z3B3 1105 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 UBE2J2Q8N2K1 259 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 FADS6Q8N9I5 356 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 AGBL5Q8NDL9 886 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 OR6N1Q8NGY5 312 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 OR52I2Q8NH67 350 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SAP25Q8TEE9 199 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 RGP1Q92546 391 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 SLC25A38Q96DW6 304 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 FAHD2AQ96GK7 314 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 TMEM41AQ96HV5 264 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 GINS4Q9BRT9 223 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ABHD6Q9BV23 337 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 FOXQ1Q9C009 403 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PPIL3Q9H2H8 161 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 TTYH1Q9H313 450 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 METTL17Q9H7H0 456 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 KLHL13Q9P2N7 655 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CTSFQ9UBX1 484 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PILRBQ9UKJ0 227 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MGAT4AQ9UM21 535 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CLEC4AQ9UMR7 237 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MAB21L2Q9Y586 359 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 A0A0B4J293 547 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 A0A1W2PPL8 197 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 AQP7P3A6NL99 342 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 B4E171 279 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 M0R233 179 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SRSF10O75494 262 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 ALDOBP05062 364 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CHRM2P08172 466 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 NAT2P11245 290 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 GTF2F2P13984 249 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 TSPAN7P41732 249 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SOX2P48431 317 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MMP16P51512 607 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 NKX2-5P52952 324 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 LSM6P62312 80 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 FOXF1Q12946 379 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 GK2Q14410 553 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 POU4F3Q15319 338 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CLVS2Q5SYC1 327 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 FAM27D1Q5T7N8 215 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 THOC7Q6I9Y2 204 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 LIN54Q6MZP7 749 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms