RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CYB5R2Q6BCY4 276 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 RPL7L1Q6DKI1 246 aaKnown RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 CLEC9AQ6UXN8 241 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 SLC35D2Q76EJ3 337 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 NPAS4Q8IUM7 802 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 GVQW1Q8N7I0 195 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 OR5T3Q8NGG3 340 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 OR13C8Q8NGS7 320 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 OR8D1Q8WZ84 308 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 MRPL38Q96DV4 380 aaKnown RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 RRNAD1Q96FB5 475 aaKnown RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 EPHX3Q9H6B9 360 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 CHRNA9Q9UGM1 479 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 A0A087WV62 115 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 C1QTNF3-AMACRE9PGA6 284 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 ADAP1O75689 374 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 GPANK1O95872 356 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 PMP2P02689 132 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 THBS1P07996 1170 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 CD14P08571 375 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 NDUFB7P17568 137 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 PI3P19957 117 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 TLX1P31314 330 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 DNASE1L1P49184 302 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 P2RY4P51582 365 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 EIF5AP63241 154 aaKnown RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 NTHL1P78549 312 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 ARHGAP19Q14CB8 494 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 NNATQ16517 81 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF674Q2M3X9 581 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 C14orf28Q4W4Y0 310 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 GALNTL5Q7Z4T8 443 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 TRAPPC6BQ86SZ2 158 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 ZSCAN4Q8NAM6 433 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 NPEPL1Q8NDH3 523 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 PPP1R14AQ96A00 147 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 SLC41A2Q96JW4 573 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 SUCNR1Q9BXA5 334 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 RAB33BQ9H082 229 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 GAR1Q9NY12 217 aaKnown RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 FLRT3Q9NZU0 649 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 KCNE5Q9UJ90 142 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 SLC22A13Q9Y226 551 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 AMDHD2Q9Y303 409 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 PUS1Q9Y606 427 aaKnown RBP eCLIP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 DENND4CQ5VZ89 1909 aa6.91□□□□□ -1.3
BRCA1-201ENST00000352993 TCF20Q9UGU0 1960 aaKnown RBP6.91□□□□□ -1.3
BRCA1-201ENST00000352993 TEX13DA0A0J9YY54 714 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR52A4PA6NMU1 304 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 NME2P1O60361 137 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR6A2O95222 327 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF888P0CJ79 500 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR13C7P0DN81 318 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 AGAP20933 346 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 HTR2CP28335 458 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 GRK6P43250 576 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 CTXN1P60606 82 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 RSU1Q15404 277 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 NRSN1Q8IZ57 195 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 CMBLQ96DG6 245 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF764Q96H86 408 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-201ENST00000352993 RNF122Q9H9V4 155 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 SDHAF3Q9NRP4 125 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 APOBEC3BQ9UH17 382 aaKnown RBP6.9□□□□□ -1.3
BRCA1-201ENST00000352993 DHDHQ9UQ10 334 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 MMP24Q9Y5R2 645 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 SCN10AQ9Y5Y9 1956 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 A0A1W2PPV9 198 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 HOXB5P09067 269 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR8U9P0C7N5 309 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ZBTB25P24278 435 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 DVL1P1P54792 670 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-201ENST00000352993 CYCSP99999 105 aaKnown RBP6.9□□□□□ -1.3
BRCA1-201ENST00000352993 PMPCAQ10713 525 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 MEF2DQ14814 521 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 MST1LQ2TV78 715 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 SLC22A6Q4U2R8 563 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 TMEM244Q5VVB8 128 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 POMZP3Q6PJE2 187 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ZAR1Q86SH2 424 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 BIVMQ86UB2 503 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ADIPOR2Q86V24 386 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR13C9Q8NGT0 318 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR2A1Q8NGT9 310 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OR8U1Q8NH10 309 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 MARCH1Q8TCQ1 289 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 CD99L2Q8TCZ2 262 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 MITD1Q8WV92 249 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF681Q96N22 645 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 INTS14Q96SY0 518 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 OPA3Q9H6K4 179 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 ZDHHC4Q9NPG8 344 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 SERTAD3Q9UJW9 196 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 CES1P1Q9UKY3 287 aa6.9□□□□□ -1.3
BRCA1-201ENST00000352993 URGCP-MRPS24S4R325 110 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms