RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FAM212BQ9NTI7 297 aaPredicted RBP14.59□□□□□ -0.07
PTPN11-201ENST00000351677 MED29Q9NX70 200 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 LHX6Q9UPM6 363 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SGCEO43556 437 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 NXPH2O95156 264 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 CSF3P09919 207 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 MRPS34P82930 218 aaKnown RBP14.59□□□□□ -0.07
PTPN11-201ENST00000351677 EMC4Q5J8M3 183 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 KIRREL2Q6UWL6 708 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 CMTM4Q8IZR5 234 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SLC25A43Q8WUT9 341 aaPredicted RBP14.59□□□□□ -0.07
PTPN11-201ENST00000351677 THOC3Q96J01 351 aaKnown RBP14.59□□□□□ -0.07
PTPN11-201ENST00000351677 DYNLRB1Q9NP97 96 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 A4GNTQ9UNA3 340 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 PUS1Q9Y606 427 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN11-201ENST00000351677 ADAMTSL1Q8N6G6 1762 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 A0A1W2PPC4 97 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 GMDSO60547 372 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SULT1C4O75897 302 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 CCL11P51671 97 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 WNT3P56703 355 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 KIAA0040Q15053 153 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 RNLSQ5VYX0 342 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 OR2L13Q8N349 312 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 OR4N2Q8NGD1 307 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 GPATCH2Q9NW75 528 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 GNG12Q9UBI6 72 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 LAMB2P55268 1798 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 A0A0A6YYJ9 748 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 YKT6O15498 198 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 TMUB2Q71RG4 321 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SMIM19Q96E16 107 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 FAM234AQ9H0X4 552 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 AKIP1Q9NQ31 210 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SERGEFQ9UGK8 458 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 KCNG2Q9UJ96 466 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SLC22A13Q9Y226 551 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 HSD17B6O14756 317 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 EVX1P49640 407 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 FAM27D1Q5T7N8 215 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SLC51BQ86UW2 128 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 WDR5BQ86VZ2 330 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 FER1L6-AS2Q96M78 137 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 SLC5A6Q9Y289 635 aa14.59□□□□□ -0.07
PTPN11-201ENST00000351677 PTGER4P35408 488 aa14.58□□□□□ -0.07
PTPN11-201ENST00000351677 WDR88Q6ZMY6 472 aa14.58□□□□□ -0.07
PTPN11-201ENST00000351677 DOK3Q7L591 496 aa14.58□□□□□ -0.07
PTPN11-201ENST00000351677 OR1M1Q8NGA1 313 aa14.58□□□□□ -0.07
PTPN11-201ENST00000351677 ISYNA1Q9NPH2 558 aa14.58□□□□□ -0.07
PTPN11-201ENST00000351677 FLVCR2Q9UPI3 526 aa14.58□□□□□ -0.07
PTPN11-201ENST00000351677 RNF212BA8MTL3 300 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 DOC2BQ14184 412 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 CDK5R1Q15078 307 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 CTF1Q16619 201 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 TMEM215Q68D42 235 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 AMER3Q8N944 861 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 WDSUB1Q8N9V3 476 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 NECAP2Q9NVZ3 263 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 DUSP13Q9UII6 198 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 COL4A1P02462 1669 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 IGLV3-16A0A075B6K0 115 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 AIPO00170 330 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 ANKRD9Q96BM1 317 aaPredicted RBP14.58□□□□□ -0.08
PTPN11-201ENST00000351677 TMEM235A6NFC5 223 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 PRKACAP17612 351 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 RAD52P43351 418 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 UBE2MP61081 183 aaKnown RBP14.58□□□□□ -0.08
PTPN11-201ENST00000351677 CATR1Q13166 79 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 BAK1Q16611 211 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 CPEB2Q7Z5Q1 589 aaKnown RBP14.58□□□□□ -0.08
PTPN11-201ENST00000351677 FGF20Q9NP95 211 aaPredicted RBP14.58□□□□□ -0.08
PTPN11-201ENST00000351677 KCNE1BA0A087WTH5 132 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 RAF1P04049 648 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 CST9LP1Q5W188 147 aa14.58□□□□□ -0.08
PTPN11-201ENST00000351677 A8MXE2 369 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 GPR171O14626 319 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 C1QBP02746 253 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 PDLIM3Q53GG5 364 aaPredicted RBP14.57□□□□□ -0.08
PTPN11-201ENST00000351677 ALG14Q96F25 216 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 PTDSS2Q9BVG9 487 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 TCEAL2Q9H3H9 227 aaPredicted RBP14.57□□□□□ -0.08
PTPN11-201ENST00000351677 PRMT8Q9NR22 394 aaPredicted RBP14.57□□□□□ -0.08
PTPN11-201ENST00000351677 PRSS37A4D1T9 235 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 ZNF793Q6ZN11 406 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 PRDM7Q9NQW5 492 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 SLC22A11Q9NSA0 550 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 PCDHB10Q9UN67 800 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 RPS10-NUDT3A0A1W2PQS6 291 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 OR6C76A6NM76 312 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 RPS10P46783 165 aaKnown RBP14.57□□□□□ -0.08
PTPN11-201ENST00000351677 ZNF133P52736 654 aaPredicted RBP14.57□□□□□ -0.08
PTPN11-201ENST00000351677 SYS1Q8N2H4 156 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 HSD17B11Q8NBQ5 300 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 NT5CQ8TCD5 201 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 RNF141Q8WVD5 230 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 SLAMF7Q9NQ25 335 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 GRPP07492 148 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 CHRM2P08172 466 aa14.57□□□□□ -0.08
PTPN11-201ENST00000351677 RRADP55042 308 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms