RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 MLF2Q15773 248 aaPredicted RBP12.87□□□□□ -0.35
RLIM-202ENST00000349225 TMEM35AQ53FP2 167 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 GVQW1Q8N7I0 195 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 OR2L5Q8NG80 312 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 AKR7LQ8NHP1 331 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 AMELYQ99218 206 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 MRPS33Q9Y291 106 aaKnown RBP12.87□□□□□ -0.35
RLIM-202ENST00000349225 ZNF780BQ9Y6R6 833 aa12.87□□□□□ -0.35
RLIM-202ENST00000349225 AK1P00568 194 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 DBIP07108 87 aaKnown RBP12.86□□□□□ -0.35
RLIM-202ENST00000349225 ERCC1P07992 297 aaPredicted RBP12.86□□□□□ -0.35
RLIM-202ENST00000349225 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
RLIM-202ENST00000349225 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 SLC41A2Q96JW4 573 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 UFSP2Q9NUQ7 469 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 ARID1AO14497 2285 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 TMEM235A6NFC5 223 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 EFSO43281 561 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 MED6O75586 246 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 GLCEO94923 617 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 INHAP05111 366 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 SKP1P63208 163 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 ID2Q02363 134 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 NRSN1Q8IZ57 195 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 ZNF565Q8N9K5 539 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 ZNF563Q8TA94 476 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 DCAF16Q9NXF7 216 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 A0A1W2PPE2 198 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 C5orf51A6NDU8 294 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 CDC40O60508 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
RLIM-202ENST00000349225 CD2P06729 351 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 VAMP1P23763 118 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 RAB2AP61019 212 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 CCDC54Q8NEL0 328 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 ZNF417Q8TAU3 575 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 CYYR1Q96J86 154 aa12.86□□□□□ -0.35
RLIM-202ENST00000349225 MRPS18BQ9Y676 258 aaKnown RBP12.86□□□□□ -0.35
RLIM-202ENST00000349225 RHPN2P1A8MT19 583 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 SLC17A2O00624 439 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 ALG10BQ5I7T1 473 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 NUS1Q96E22 293 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 ZDHHC12Q96GR4 267 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 PHB2Q99623 299 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 ADAP2Q9NPF8 381 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 GPR34Q9UPC5 381 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 METTL21EPA6NDL7 271 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 URADA6NGE7 173 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 TVP23AA6NH52 213 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 LATO43561 262 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 CYB5AP00167 134 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 AKR1C4P17516 323 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 FAM76BQ5HYJ3 339 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 RPL7L1Q6DKI1 246 aaKnown RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 LRRC25Q8N386 305 aaPredicted RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 SAT2Q96F10 170 aaPredicted RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 INSL5Q9Y5Q6 135 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 HOXB5P09067 269 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 HOXA5P20719 270 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 GLP1RP43220 463 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 BTN3A2P78410 334 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 FAM53BQ14153 422 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 RAB11BQ15907 218 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 TEX30Q5JUR7 227 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 SSX9Q7RTT3 188 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 SLC43A2Q8N370 569 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 ZNF676Q8N7Q3 588 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 PARP12Q9H0J9 701 aaKnown RBP12.85□□□□□ -0.35
RLIM-202ENST00000349225 TUBA4BQ9H853 241 aa12.85□□□□□ -0.35
RLIM-202ENST00000349225 OR10H2O60403 315 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 ADAP1O75689 374 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 SLC7A9P82251 487 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 WDR38Q5JTN6 314 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 SLC35D3Q5M8T2 416 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 AMZ2Q86W34 360 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 MALSU1Q96EH3 234 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 CDV3Q9UKY7 258 aaKnown RBP12.84□□□□□ -0.35
RLIM-202ENST00000349225 THSD7BQ9C0I4 1608 aa12.84□□□□□ -0.35
RLIM-202ENST00000349225 MOSPD3O75425 235 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms