RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 RBP2P50120 134 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 EIF5AP63241 154 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 CYCSP99999 105 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 MEF2DQ14814 521 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 REC114Q7Z4M0 266 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 ARRDC1Q8N5I2 433 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 NUBPLQ8TB37 319 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 THRSPQ92748 146 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 MAP3K3Q99759 626 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 TRPM6Q9BX84 2022 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 LYRM4Q9HD34 91 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 PPP1R14DQ9NXH3 145 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 USP36Q9P275 1121 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC17A4Q9Y2C5 497 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 PRRC2BQ5JSZ5 2229 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 A0A1W2PPH5 198 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 C9JQL5 133 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC17A2O00624 439 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 NARSO43776 548 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 B3GALT2O43825 422 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 BRINP1O60477 761 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 GLCEO94923 617 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ABHD16AO95870 558 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 IFNA10P01566 189 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 IFNA17P01571 189 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 CD63P08962 238 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC2A1P11166 492 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TACR3P29371 465 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 PEBP1P30086 187 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 AQP2P41181 271 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 LPAR6P43657 344 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 RABIFP47224 123 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 CX3CR1P49238 355 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ELOCQ15369 112 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 RAB11BQ15907 218 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF239Q16600 458 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 C2orf76Q3KRA6 126 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 AWAT1Q58HT5 328 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 PRRT3Q5FWE3 981 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ARHGAP40Q5TG30 622 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 EIF5AL1Q6IS14 154 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 FAM166AQ6J272 317 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 COX18Q8N8Q8 333 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF565Q8N9K5 539 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZSCAN4Q8NAM6 433 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 HOXB13Q92826 284 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 MCHR2Q969V1 340 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 FAM3DQ96BQ1 224 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TM4SF19Q96DZ7 209 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC6A7Q99884 636 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 PRRT1Q99946 306 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ATG5Q9H1Y0 275 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ADAM18Q9Y3Q7 739 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ENTPD2Q9Y5L3 495 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 IER3IP1Q9Y5U9 82 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TBC1D3DA0A087WVF3 549 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TBC1D3IA0A087WXS9 549 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TMEM72A0PK05 275 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 OR4C45A6NMZ5 311 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TBC1D3LB9A6J9 549 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 PSMD9O00233 223 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ARPC3O15145 178 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 DUS4LO95620 317 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 LY86O95711 162 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 LINC00271P0C7V0 271 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF888P0CJ79 500 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 CD80P33681 288 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 CDX1P47902 265 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 GSK3AP49840 483 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SULT1A2P50226 295 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SPCS3P61009 180 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 IL13RA1P78552 427 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TCEAL5Q5H9L2 206 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 KRBOX4Q5JUW0 171 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 LINC01590Q5TEZ4 76 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 NSUN5P2Q63ZY6 315 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TBC1D3CQ6IPX1 549 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF585AQ6P3V2 769 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 LINC00114Q6XXX2 140 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 VN1R4Q7Z5H5 301 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TBC1D3Q8IZP1 549 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNF383Q8NA42 475 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 OR10H5Q8NGA6 315 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 GPR148Q8TDV2 347 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 TMEM106AQ96A25 262 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 SLAMF9Q96A28 289 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 RRNAD1Q96FB5 475 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 AKR1E2Q96JD6 320 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 AQP10Q96PS8 301 aa9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 CCNL2Q96S94 520 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-202ENST00000348749 MACROD1Q9BQ69 325 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms