RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 POU4F2Q12837 409 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 GABRA6Q16445 453 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 PCK2Q16822 640 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 HIKESHIQ53FT3 197 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 FAM27BQ5VT28 67 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 BEND4Q6ZU67 534 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 MRGPRGQ86SM5 289 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 STX19Q8N4C7 294 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 IPCEF1Q8WWN9 437 aaPredicted RBP16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 FBXO17Q96EF6 278 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 TMEM80Q96HE8 168 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF224Q9NZL3 707 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 CLEC2DQ9UHP7 191 aa16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 DIMT1Q9UNQ2 313 aaKnown RBP16.64■□□□□ 0.26
CHMP4A-201ENST00000347519 C12orf71A8MTZ7 269 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 MAGEB4O15481 346 aaPredicted RBP16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 RAD51DO75771 328 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 TNFAIP8O95379 198 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 RAB36O95755 333 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 EEF1B2P24534 225 aaKnown RBP16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 ETV1P50549 477 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 LSM6P62312 80 aaKnown RBP16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 TUBA1BP68363 451 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 TUBA4AP68366 448 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 DOC2BQ14184 412 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 TEX30Q5JUR7 227 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 SLC18B1Q6NT16 456 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 TUBA1AQ71U36 451 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 LHFPL3Q86UP9 236 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 OR10H5Q8NGA6 315 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 YIPF3Q9GZM5 350 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 NOX3Q9HBY0 568 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 CYB5R1Q9UHQ9 305 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 ERRFI1Q9UJM3 462 aaPredicted RBP16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 BLOC1S6Q9UL45 172 aa16.64■□□□□ 0.25
CHMP4A-201ENST00000347519 DIDO1Q9BTC0 2240 aaKnown RBP16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 A0A1W2PQL4 384 aaPredicted RBP16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 FAM90A27PA6NNH2 459 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 RGS10O43665 173 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 FADS2O95864 444 aaKnown RBP16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 CST2P09228 141 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 LIMS3P0CW19 117 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 LIMS4P0CW20 117 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 SMIM18P0DKX4 95 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 ALOX5APP20292 161 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 CHRNB4P30926 498 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 SH3BGRP55822 239 aaPredicted RBP16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 FAM27E3Q08E93 113 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 IRF3Q14653 427 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 TBRG1Q3YBR2 411 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 SFRP5Q5T4F7 317 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 ANKRD16Q6P6B7 361 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 STAC2Q6ZMT1 411 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 CFAP77Q6ZQR2 320 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 OTOSQ8NHW6 89 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 MYDGFQ969H8 173 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 MAP6Q96JE9 813 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 ASH2LQ9UBL3 628 aa16.63■□□□□ 0.25
CHMP4A-201ENST00000347519 CIB4A0PJX0 185 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 IRGMA1A4Y4 181 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 OR2T7P0C7T2 308 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 OR8G3PP0DMU2 310 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 DCKP27707 260 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 GUCA1AP43080 201 aaPredicted RBP16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 MAP2K4P45985 399 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 EIF2B1Q14232 305 aaKnown RBP16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 P2RY6Q15077 328 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 NRN1LQ496H8 165 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 BHLHA15Q7RTS1 189 aaPredicted RBP16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 DCXRQ7Z4W1 244 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 ACBD7Q8N6N7 88 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 WDR31Q8NA23 367 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 OR10S1Q8NGN2 331 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 OR2T27Q8NH04 317 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 ST7LQ8TDW4 575 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 ABHD6Q9BV23 337 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 JAM3Q9BX67 310 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 CCDC90BQ9GZT6 254 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 ERVK13-1Q9NX77 482 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 GALNT8Q9NY28 637 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 GDF2Q9UK05 429 aaPredicted RBP16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 POLR1DQ9Y2S0 133 aa16.62■□□□□ 0.25
CHMP4A-201ENST00000347519 ASH1LQ9NR48 2969 aaKnown RBP16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 A0A1W2PR80 420 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 NKX2-6A6NCS4 301 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 PSMD9O00233 223 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 RER1O15258 196 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 ZG16O60844 167 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 HLA-HP01893 362 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 MMP7P09237 267 aaPredicted RBP16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 ZNF32P17041 273 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 CCKARP32238 428 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 HIST1H3AP68431 136 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 HIST2H3PS2Q5TEC6 136 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 TMEM154Q6P9G4 183 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 ZNF773Q6PK81 442 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 HIST2H3AQ71DI3 136 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 SPATC1Q76KD6 591 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 SLC16A14Q7RTX9 510 aa16.61■□□□□ 0.25
CHMP4A-201ENST00000347519 PRSS48Q7RTY5 328 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms