RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SMPDL3BQ92485 455 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 DPCDQ9BVM2 203 aaPredicted RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 MOKQ9UQ07 419 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 DCHS1Q96JQ0 3298 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 ZNF292O60281 2723 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 A0A087WZY1 265 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 A0A1B0GUH1 482 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 FTCDNL1E5RQL4 147 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 PLPP3O14495 311 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 OGG1O15527 345 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 RENP00797 406 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 FREM3P0C091 2139 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 FTH1P19P0C7X4 201 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 SPI1P17947 270 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 FKBP2P26885 142 aaKnown RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 ADH6P28332 368 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 CCR9P51686 369 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 PUDPQ08623 228 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 KLF9Q13886 244 aaPredicted RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 PRAMEF20Q5VT98 475 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 ZNF248Q8NDW4 579 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 ASB13Q8WXK3 278 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 DACT3Q96B18 629 aaPredicted RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 NTNG2Q96CW9 530 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 IP6K3Q96PC2 410 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 TMPRSS13Q9BYE2 586 aa11.51□□□□□ -0.57
CLK3-201ENST00000345005 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
CLK3-201ENST00000345005 RPS10-NUDT3A0A1W2PQS6 291 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 C11orf98E9PRG8 122 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 TOR1AO14656 332 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 GPRIN2O60269 458 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 GLCEO94923 617 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 TFPIP10646 304 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 EPXP11678 715 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 PSMB1P20618 241 aaKnown RBP11.5□□□□□ -0.57
CLK3-201ENST00000345005 CBX5P45973 191 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 RAP2BP61225 183 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 ZP4Q12836 540 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 SLC6A19Q695T7 634 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 JMJD6Q6NYC1 403 aaPredicted RBP11.5□□□□□ -0.57
CLK3-201ENST00000345005 GPAT4Q86UL3 456 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 OR11H4Q8NGC9 324 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 POC1BQ8TC44 478 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 RBPMSQ93062 196 aaKnown RBP11.5□□□□□ -0.57
CLK3-201ENST00000345005 ZBTB8AQ96BR9 441 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 ZMYND19Q96E35 227 aaPredicted RBP11.5□□□□□ -0.57
CLK3-201ENST00000345005 DNAJA3Q96EY1 480 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 TSPAN32Q96QS1 320 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 CNN2Q99439 309 aaKnown RBP11.5□□□□□ -0.57
CLK3-201ENST00000345005 TBX5Q99593 518 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 TIMP4Q99727 224 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 NPAS1Q99742 590 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 TXNIPQ9H3M7 391 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 ZC4H2Q9NQZ6 224 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 ZNF224Q9NZL3 707 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 FBXL2Q9UKC9 423 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 FBXL3Q9UKT7 428 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 SIRT4Q9Y6E7 314 aaPredicted RBP11.5□□□□□ -0.57
CLK3-201ENST00000345005 PCSK5Q92824 1860 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 PTPRBP23467 1997 aa11.5□□□□□ -0.57
CLK3-201ENST00000345005 LOC101059948A0A1B0GTJ6 334 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 A0A1B0GW55 424 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 A0A1W2PPL8 197 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 SNRPGP15A8MWD9 76 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 KRBOX1C9JBD0 128 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 GABARAPH6UMI1 98 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 MASP2O00187 686 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 XKRYO14609 159 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 IL5P05113 134 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 MRPL3P09001 348 aaKnown RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 GIPP09681 153 aaPredicted RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 OR2T7P0C7T2 308 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 DUX4L2P0CJ85 424 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 DUX4L3P0CJ86 424 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 DUX4L4P0CJ87 422 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 DUX4L5P0CJ88 424 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 DUX4L6P0CJ89 424 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 DUX4L7P0CJ90 424 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 CCL3P10147 92 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 CD82P27701 267 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 RPL27P61353 136 aaKnown RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 SLC3A1Q07837 685 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 INSL4Q14641 139 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 INPP5JQ15735 1006 aaPredicted RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 ST3GAL2Q16842 350 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 RPL22L1Q6P5R6 122 aaKnown RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 H1FNTQ75WM6 255 aaPredicted RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 TMPRSS12Q86WS5 348 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 OR2T27Q8NH04 317 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 ZNF417Q8TAU3 575 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 SLC25A43Q8WUT9 341 aaPredicted RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 ARL5BQ96KC2 179 aa11.49□□□□□ -0.57
CLK3-201ENST00000345005 ZNF587Q96SQ5 575 aaPredicted RBP11.49□□□□□ -0.57
CLK3-201ENST00000345005 BRD7Q9NPI1 651 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms