RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 NDE1Q9NXR1 346 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 DUSP13Q9UII6 198 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 AURKCQ9UQB9 309 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 IER3IP1Q9Y5U9 82 aa12.36□□□□□ -0.43
HMGN3-202ENST00000344726 LRP5LA4QPB2 252 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 XKRYO14609 159 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 NCR1O76036 304 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 HPXP02790 462 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 LCKP06239 509 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 NAT2P11245 290 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 MSR1P21757 451 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 IGFBP5P24593 272 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 GIFP27352 417 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 RRM2P31350 389 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 DBPQ10586 325 aaPredicted RBP12.35□□□□□ -0.43
HMGN3-202ENST00000344726 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 ELFN2Q5R3F8 820 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 ZDHHC21Q8IVQ6 265 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF786Q8N393 782 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 ICA1LQ8NDH6 482 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 OR1J2Q8NGS2 313 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 UBASH3BQ8TF42 649 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 SYT4Q9H2B2 425 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 FAM53CQ9NYF3 392 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 ACTR3BQ9P1U1 418 aa12.35□□□□□ -0.43
HMGN3-202ENST00000344726 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 SOCS2O14508 198 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 AHCYL1O43865 530 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 LILRA1O75019 489 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 MPZL1O95297 269 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TXNDC12O95881 172 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 ERCC1P07992 297 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-202ENST00000344726 ZNF23P17027 643 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 CDKN2AP42771 156 aaKnown RBP12.34□□□□□ -0.43
HMGN3-202ENST00000344726 RAD52P43351 418 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 MNAT1P51948 309 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 SMIM11AP58511 58 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 RIN1Q13671 783 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TRIP10Q15642 601 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 GPR139Q6DWJ6 353 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 SMARCD3Q6STE5 483 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 DPY19L2P2Q6ZN68 376 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 IL17RELQ6ZVW7 336 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 CCDC197Q8NCU1 140 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 FANK1Q8TC84 345 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
HMGN3-202ENST00000344726 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 BCL2L14Q9BZR8 327 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 LRMDAQ9H2I8 198 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TAAR3PQ9P1P4 343 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 COA3Q9Y2R0 106 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TIMM10BQ9Y5J6 103 aa12.34□□□□□ -0.43
HMGN3-202ENST00000344726 TANC2Q9HCD6 1990 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 DCTN6O00399 190 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 OR10H3O60404 316 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 SLC16A7O60669 478 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 PPP1R3DO95685 299 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 GPANK1O95872 356 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 COL8A2P25067 703 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 FPR3P25089 353 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 MPV17P39210 176 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 MAGEB1P43366 347 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 GSSP48637 474 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 GDI2P50395 445 aaKnown RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 KLF3P57682 345 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 MS4A2Q01362 244 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 RFX4Q33E94 735 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 SPATA46Q5T0L3 261 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 RFPL4BQ6ZWI9 263 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 C11orf40Q8WZ69 217 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 YIPF5Q969M3 257 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 MARS2Q96GW9 593 aaKnown RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 NDEL1Q9GZM8 345 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 NUAK2Q9H093 628 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 OR52D1Q9H346 318 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 KRCC1Q9NPI7 259 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-202ENST00000344726 LYVE1Q9Y5Y7 322 aa12.33□□□□□ -0.44
HMGN3-202ENST00000344726 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 LMX1BO60663 402 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 NGFP01138 241 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 TACSTD2P09758 323 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 CALB2P22676 271 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 MAGEA2P43356 314 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 GZMKP49863 264 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
HMGN3-202ENST00000344726 PCBD1P61457 104 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms