RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 HCFC1P51610 2035 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ZNF626Q68DY1 528 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ZMAT3Q9HA38 289 aaKnown RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 CDRT15L2A8MXV6 281 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 LINC00587B1AMM8 73 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 TP53I11O14683 189 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 SLC10A1Q14973 349 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 C2orf50Q96LR7 162 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 DCCP43146 1447 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 PDLIM5Q96HC4 596 aaKnown RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 PIRO00625 290 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 HRO43593 1189 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 IFITM3Q01628 133 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 CHAC2Q8WUX2 184 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 TEX101Q9BY14 249 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SNU13P55769 128 aaKnown RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SPTSSAQ969W0 71 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SELENOIQ9C0D9 397 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 C1orf198Q9H425 327 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SLC25A37Q9NYZ2 338 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 RAB28P51157 221 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 ERVK-16P61578 105 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 TRA2BP62995 288 aaKnown RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 SYPL1Q16563 259 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SOCS4Q8WXH5 440 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SLC35D1Q9NTN3 355 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 GALR1P47211 349 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 OTUD1Q5VV17 481 aaPredicted RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 GCDHQ92947 438 aaPredicted RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 PADI1Q9ULC6 663 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 FOXE1O00358 373 aaPredicted RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 NPBWR1P48145 328 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 RING1Q06587 406 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 RNF224P0DH78 156 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 MRM1Q6IN84 353 aaKnown RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 NHLRC1Q6VVB1 395 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 ZNF836Q6ZNA1 936 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 CPXM2Q8N436 756 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 OR51A4Q8NGJ6 313 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 AFMIDQ63HM1 303 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SEZ6L2Q6UXD5 910 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 NEIL2Q969S2 332 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 ARHGDIGQ99819 225 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 PLEKHB1Q9UF11 243 aaPredicted RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 GDF7Q7Z4P5 450 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 ABHD12BQ7Z5M8 362 aaPredicted RBP12.54□□□□□ -0.4
TRIO-202ENST00000344204 OR14C36Q8NHC7 312 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 UBQLN4Q9NRR5 601 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 NRXN3Q9Y4C0 1643 aa12.54□□□□□ -0.4
TRIO-202ENST00000344204 SSX1Q16384 188 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 GHITMQ9H3K2 345 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 ADAM29Q9UKF5 820 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 ZNF860A6NHJ4 632 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 NOVA1P51513 510 aaKnown RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 SLC22A24Q8N4F4 322 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 CDRT4Q8N9R6 151 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 CYB5D2Q8WUJ1 264 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 RNF181Q9P0P0 153 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 GNG10P50151 68 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 CASP6P55212 293 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 SLC25A35Q3KQZ1 300 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 OR11H7Q8NGC8 314 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 PPM1DO15297 605 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 SIAH2O43255 324 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 FURINP09958 794 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 HRH1P35367 487 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TMEM99Q8N816 258 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 SUMF1Q8NBK3 374 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 SULT1A1P50225 295 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PMPCAQ10713 525 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 MEP1BQ16820 701 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 PRSS58Q8IYP2 241 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 TACR1P25103 407 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 MPGP29372 298 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 DAP3P51398 398 aaKnown RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 DEFB134Q4QY38 66 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 FAM160A2Q8N612 972 aaPredicted RBP12.53□□□□□ -0.4
TRIO-202ENST00000344204 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
TRIO-202ENST00000344204 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms