RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
HOXA1-201ENST00000343060 SLC17A4Q9Y2C5 497 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 HEBP2Q9Y5Z4 205 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 POMT1Q9Y6A1 747 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 COLEC10Q9Y6Z7 277 aa8.72□□□□□ -1.01
HOXA1-201ENST00000343060 EFSO43281 561 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TNFSF14O43557 240 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CEACAM5P06731 702 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 RHOP08100 348 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 FBXO45P0C2W1 286 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF806P0C7X5 589 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CSF2RAP15509 400 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 AVPR2P30518 371 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CCKBRP32239 447 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 DRD3P35462 400 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 HAAOP46952 286 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TM4SF4P48230 202 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 IL13RA1P78552 427 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 HGFACQ04756 655 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 EIF2S3LQ2VIR3 472 aaKnown RBP8.71□□□□□ -1.02
HOXA1-201ENST00000343060 GAB4Q2WGN9 574 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 SCGB2B2Q4G0G5 96 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 MESTQ5EB52 335 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TEX30Q5JUR7 227 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 DBX2Q6ZNG2 339 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF627Q7L945 461 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ZSCAN1Q8NBB4 408 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 OR52R1Q8NGF1 315 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 OR6N2Q8NGY6 317 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 DCUN1D4Q92564 292 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 VWCEQ96DN2 955 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 OR8B4Q96RC9 309 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 LMF1Q96S06 567 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 INTS14Q96SY0 518 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 PHPT1Q9NRX4 125 aaPredicted RBP8.71□□□□□ -1.02
HOXA1-201ENST00000343060 RHBDD3Q9Y3P4 386 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 LOC390937A0A1W2PQ73 354 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 MFNGO00587 321 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ADH1CP00326 375 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 IGHV2-5P01817 119 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 SFTA3P0C7M3 94 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF44P15621 663 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 RAB6AP20340 208 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 MAOAP21397 527 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 S1PR1P21453 382 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 RABIFP47224 123 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CTXN1P60606 82 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CDNFQ49AH0 187 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 RNASE10Q5GAN6 216 aaKnown RBP8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TMEM244Q5VVB8 128 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 PLPP4Q5VZY2 271 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 DPY19L4Q7Z388 723 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 LYPD6Q86Y78 171 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 PLPP7Q8NBV4 271 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 OTOSQ8NHW6 89 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 PHOSPHO1Q8TCT1 267 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 RNF128Q8TEB7 428 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 EDARADDQ8WWZ3 215 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ZC3H10Q96K80 434 aaKnown RBP8.71□□□□□ -1.02
HOXA1-201ENST00000343060 LRRC3BQ96PB8 259 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 AQP10Q96PS8 301 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TAAR9Q96RI9 348 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 AMELYQ99218 206 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 NIT2Q9NQR4 276 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TMED7Q9Y3B3 224 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 FAM96BQ9Y3D0 163 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 PCDHGA1Q9Y5H4 931 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 TIMM10BQ9Y5J6 103 aa8.71□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF705EA8MWA4 302 aaPredicted RBP8.7□□□□□ -1.02
HOXA1-201ENST00000343060 RNASEK-C17orf49H0YIS7 233 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 H0YIZ8 118 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 CTSVO60911 334 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 STK17BO94768 372 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 FCGR3AP08637 254 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 ASAH2BP0C7U1 165 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 LIPCP11150 499 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 GRK6P43250 576 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 ADPRHP54922 357 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 STARD6P59095 220 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 SMCO1Q147U7 214 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 SLC17A1Q14916 467 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 MOGAT2Q3SYC2 334 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF260Q3ZCT1 412 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 ALG10Q5BKT4 473 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 C1orf100Q5SVJ3 147 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 AGBL4Q5VU57 503 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 ZNF561Q8N587 486 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 RSC1A1Q92681 617 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 ANKRD9Q96BM1 317 aaPredicted RBP8.7□□□□□ -1.02
HOXA1-201ENST00000343060 OR5B2Q96R09 309 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 NUDT9Q9BW91 350 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 TUBA4BQ9H853 241 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 FARSAQ9Y285 508 aaKnown RBP8.7□□□□□ -1.02
HOXA1-201ENST00000343060 WIF1Q9Y5W5 379 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 HEATR5AQ86XA9 2040 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 A0A0B4J2A0 478 aa8.7□□□□□ -1.02
HOXA1-201ENST00000343060 PMS2P1A4D2B8 440 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms