RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 IL7P13232 177 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 ENPP1P22413 925 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 MAPK3P27361 379 aaPredicted RBP17.77■□□□□ 0.44
RTN1-202ENST00000342503 APEX1P27695 318 aaKnown RBP17.77■□□□□ 0.44
RTN1-202ENST00000342503 NBL1P41271 181 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 STARP49675 285 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 CATSPERDQ86XM0 798 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 TRMT10AQ8TBZ6 339 aaKnown RBP17.77■□□□□ 0.44
RTN1-202ENST00000342503 PPP1R14AQ96A00 147 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 SP140LQ9H930 580 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 SEC61A2Q9H9S3 476 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 ASCL3Q9NQ33 180 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 FBXL3Q9UKT7 428 aa17.77■□□□□ 0.44
RTN1-202ENST00000342503 CACNA1CQ13936 2221 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 H3BSH0 61 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 GPR171O14626 319 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 DNPH1O43598 174 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 SRSF10O75494 262 aaKnown RBP17.76■□□□□ 0.43
RTN1-202ENST00000342503 CDAP32320 146 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 DEFA1P59665 94 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 DEFA3P59666 94 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 RAC3P60763 192 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 LRFN4Q6PJG9 635 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 SULF2Q8IWU5 870 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 SAMD12Q8N8I0 201 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 OR51A4Q8NGJ6 313 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 GPR148Q8TDV2 347 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 ZNF385AQ96PM9 386 aaKnown RBP17.76■□□□□ 0.43
RTN1-202ENST00000342503 PRRX2Q99811 253 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 PPP1R3EQ9H7J1 279 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 EMC7Q9NPA0 242 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 CYB5R1Q9UHQ9 305 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 R4GMQ9 66 aa17.76■□□□□ 0.43
RTN1-202ENST00000342503 TRBV5-7A0A0A0MS05 114 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 ARGFXA6NJG6 315 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 SMAD9O15198 467 aaKnown RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 EIF4EP06730 217 aaKnown RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 CSF3P09919 207 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 RFC3P40938 356 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 SUCLG1P53597 346 aaKnown RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 CARD18P57730 90 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 IL18Q14116 193 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 ZNF544Q6NX49 715 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 UBQLNLQ8IYU4 475 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 IL17RDQ8NFM7 739 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 TMEM54Q969K7 222 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 OR2M2Q96R28 347 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 GLTPQ9NZD2 209 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 EXTL2Q9UBQ6 330 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 TBC1D24Q9ULP9 559 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 PHF3Q92576 2039 aaKnown RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 A0A0B4J203 849 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 PTTG1O95997 202 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 H2BFMP0C1H6 154 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 SNRPBP14678 240 aaKnown RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 SPNP16150 400 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 POU3F2P20265 443 aaPredicted RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 PTBP1P26599 531 aaKnown RBP eCLIP17.75■□□□□ 0.43
RTN1-202ENST00000342503 EIF1AXP47813 144 aaKnown RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 CSNK1A1P48729 337 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 GFRA1P56159 465 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 CDC20Q12834 499 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 P2RY14Q15391 338 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 DEGS2Q6QHC5 323 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 ESPNLQ6ZVH7 1005 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 VASH2Q86V25 355 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 LRRC28Q86X40 367 aaPredicted RBP17.75■□□□□ 0.43
RTN1-202ENST00000342503 GALNT16Q8N428 558 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 OR5H6Q8NGV6 325 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 OR2V1Q8NHB1 315 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 RNF133Q8WVZ7 376 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 HTRA1Q92743 480 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 SLAMF6Q96DU3 332 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 ADGRG7Q96K78 797 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 LRFN3Q9BTN0 628 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 CENPMQ9NSP4 180 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 ABRACLQ9P1F3 81 aa17.75■□□□□ 0.43
RTN1-202ENST00000342503 A0A1W2PQ09 198 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 ANKRD61A6NGH8 418 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 CXCL13O43927 109 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 CSRP1P21291 193 aaKnown RBP17.74■□□□□ 0.43
RTN1-202ENST00000342503 PHYHD1Q5SRE7 291 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 STAC2Q6ZMT1 411 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 ASB18Q6ZVZ8 466 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 ZNF433Q8N7K0 673 aaPredicted RBP17.74■□□□□ 0.43
RTN1-202ENST00000342503 ZIC4Q8N9L1 334 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 OR6N1Q8NGY5 312 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 SLITRK2Q9H156 845 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 ZNF703Q9H7S9 590 aaPredicted RBP17.74■□□□□ 0.43
RTN1-202ENST00000342503 TCF7L1Q9HCS4 588 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 CYSLTR2Q9NS75 346 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 EMC9Q9Y3B6 208 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 LHFPL6Q9Y693 200 aa17.74■□□□□ 0.43
RTN1-202ENST00000342503 FREM2Q5SZK8 3169 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 FUOMA2VDF0 154 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 A6NL46 340 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 NPR2P20594 1047 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 CLDN15P56746 228 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 KCNMB1Q16558 191 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 HES5Q5TA89 166 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms