RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RPL3LQ92901 407 aaKnown RBP13.7□□□□□ -0.22
UBE3B-202ENST00000342494 SEC22AQ96IW7 307 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 OXGR1Q96P68 337 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 BANF2Q9H503 90 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 POMT2Q9UKY4 750 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 M0R135 149 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 UBL3O95164 117 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 PNLIPRP2P54317 469 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 CDONQ4KMG0 1287 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 USP51Q70EK9 711 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 OR51E1Q8TCB6 317 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 ZDHHC16Q969W1 377 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF799Q96GE5 643 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 MRGPRX4Q96LA9 322 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 TEX101Q9BY14 249 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 R4GN57 208 aa13.7□□□□□ -0.22
UBE3B-202ENST00000342494 MT-CO3P00414 261 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 ADH4P08319 380 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SRMP19623 302 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF718Q3SXZ3 478 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 NCCRP1Q6ZVX7 275 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 H2BFWTQ7Z2G1 175 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 CATSPERDQ86XM0 798 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 KISS1RQ969F8 398 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SLCO1B1Q9Y6L6 691 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 M0QYG6 137 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 CBR3O75828 277 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 NXPH3O95157 252 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 ECI1P42126 302 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SLC6A12P48065 614 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 RPS27AP62979 156 aaKnown RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 UBA52P62987 128 aaKnown RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 ACVR1Q04771 509 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 IL34Q6ZMJ4 242 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SAMD10Q9BYL1 202 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SLA2Q9H6Q3 261 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 TRAV17A0A0B4J275 112 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 CHRM2P08172 466 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 PRPH2P23942 346 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SPRED3Q2MJR0 410 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 PRKNO60260 465 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 CSF3P09919 207 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 AADACP22760 399 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SDHAP31040 664 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 DUSP8Q13202 625 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 PLPP5Q8NEB5 264 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 SMAP2Q8WU79 429 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 GAB3Q8WWW8 586 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 LOC107986453A0A1B0GWG9 222 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 MRPL19P49406 292 aaKnown RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 CLINT1Q14677 625 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 PRAMEF5Q5TYX0 476 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 PRAMEF6Q5VXH4 476 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 CORO6Q6QEF8 472 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 NAA40Q86UY6 237 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 OR51H1Q8NH63 302 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 DVL3Q92997 716 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-202ENST00000342494 TEAD3Q99594 435 aa13.69□□□□□ -0.22
UBE3B-202ENST00000342494 A0A087WZY1 265 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 K7EQM0 130 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SSTR2P30874 369 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 RNF4P78317 190 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 TLE4Q04727 773 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 EMC4Q5J8M3 183 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 LACC1Q8IV20 430 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 ARIH2OSQ8N7S6 290 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 TEX37Q96LM6 180 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 TPPP3Q9BW30 176 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 NUDT9Q9BW91 350 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 MOB1AQ9H8S9 216 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 FAM212BQ9NTI7 297 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 GPATCH2Q9NW75 528 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SIRPB1O00241 398 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 PIAS2O75928 621 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SNRNP70P08621 437 aaKnown RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 TBPP20226 339 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 FABP6P51161 128 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 LIPNQ5VXI9 398 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 PDCD1LG2Q9BQ51 273 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 KLK4Q9Y5K2 254 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 DBPQ10586 325 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 IAH1Q2TAA2 248 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 XKR7Q5GH72 579 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 TFAP2EQ6VUC0 442 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 LAX1Q8IWV1 398 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 DND1Q8IYX4 353 aaKnown RBP13.68□□□□□ -0.22
UBE3B-202ENST00000342494 LGI3Q8N145 548 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 PRSS35Q8N3Z0 413 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SUMF1Q8NBK3 374 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 SLCO4A1Q96BD0 722 aa13.68□□□□□ -0.22
UBE3B-202ENST00000342494 OPALINQ96PE5 141 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms