RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 RASGEF1BQ0VAM2 473 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 SLC17A1Q14916 467 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF595Q8IYB9 648 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 RNF215Q9Y6U7 377 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 KANTRA0A1W2PQU2 76 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 H0YIG0 161 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF254O75437 659 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 RIDAP52758 137 aaKnown RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 EIF2B5Q13144 721 aaKnown RBP12.98□□□□□ -0.33
CPSF7-201ENST00000340437 SKP2Q13309 424 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 SLC18B1Q6NT16 456 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 OTOSQ8NHW6 89 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 NUDCD2Q8WVJ2 157 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 SLC25A28Q96A46 364 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 CMTM3Q96MX0 182 aa12.98□□□□□ -0.33
CPSF7-201ENST00000340437 TTC28Q96AY4 2481 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 TRBV5-5A0A0J9YX44 114 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 LOC101059948A0A1B0GTJ6 334 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 C5orf67F2Z3F1 127 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 F5H0A9 414 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-201ENST00000340437 NAT1P18440 290 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 IL11P20809 199 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 IL10RAQ13651 578 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 CDH26Q8IXH8 852 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 OR6N1Q8NGY5 312 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 C15orf40Q8WUR7 153 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 PMM1Q92871 262 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 GABRG3Q99928 467 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-201ENST00000340437 PCNX3Q9H6A9 2034 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 ASAH2BP0C7U1 165 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 GP1BBP13224 206 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF823P16415 610 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 CAPZA1P52907 286 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 UBE2IP63279 158 aaKnown RBP12.97□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM225Q6GV28 225 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 OR1S1Q8NH92 325 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-201ENST00000340437 ABHD6Q9BV23 337 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 EMC6Q9BV81 110 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 POTEKPQ9BYX7 375 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 PRR13Q9NZ81 148 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 OR5H14A6NHG9 310 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 D6RAR5 112 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 NR0B2Q15466 257 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 OR7A5Q15622 319 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 NSDHLQ15738 373 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 DEFB133Q30KQ1 61 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 EEF1A1P5Q5VTE0 462 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF584Q8IVC4 421 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 ARMC10Q8N2F6 343 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF615Q8N8J6 731 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 BVESQ8NE79 360 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 PXT1Q8NFP0 134 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 CCDC107Q8WV48 283 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 SEH1LQ96EE3 360 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 LRFN5Q96NI6 719 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 EVA1AQ9H8M9 152 aa12.97□□□□□ -0.33
CPSF7-201ENST00000340437 IGHV5-51A0A0C4DH38 117 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 SHISA8B8ZZ34 492 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 GABRG2P18507 467 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 SLC25A1P53007 311 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 PLCXD2Q0VAA5 305 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 TMPRSS9Q7Z410 1059 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 FOXRED2Q8IWF2 684 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 LRRC46Q96FV0 321 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 SLC41A2Q96JW4 573 aa12.96□□□□□ -0.33
CPSF7-201ENST00000340437 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
CPSF7-201ENST00000340437 KIR2DS5A0A0G2JLQ3 304 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 A0A0G2JNG1 304 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 H3BML4 177 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 KIR2DS3K7RE56 304 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 TNFRSF10CO14798 259 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.34
CPSF7-201ENST00000340437 KIR2DS5Q14953 304 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 RTN4RL2Q86UN3 420 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 LRRC75AQ8NAA5 344 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 GPBAR1Q8TDU6 330 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 LCORQ96JN0 433 aaPredicted RBP12.96□□□□□ -0.34
CPSF7-201ENST00000340437 ZNF587Q96SQ5 575 aaPredicted RBP12.96□□□□□ -0.34
CPSF7-201ENST00000340437 ADAT1Q9BUB4 502 aaKnown RBP12.96□□□□□ -0.34
CPSF7-201ENST00000340437 WDR13Q9H1Z4 485 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 ASF1BQ9NVP2 202 aa12.96□□□□□ -0.34
CPSF7-201ENST00000340437 OR2AT4A6NND4 320 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 SLC17A2O00624 439 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 SLC2A1P11166 492 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 DLSTP36957 453 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 ATP1B3P54709 279 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 TAS2R19P59542 299 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 MANEAQ5SRI9 462 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 DCXRQ7Z4W1 244 aa12.95□□□□□ -0.34
CPSF7-201ENST00000340437 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms