RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 FPR2P25090 351 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 RPL27P61353 136 aaKnown RBP13.8□□□□□ -0.2
H3F3C-201ENST00000340398 TNFAIP6P98066 277 aaPredicted RBP13.8□□□□□ -0.2
H3F3C-201ENST00000340398 ENDOGQ14249 297 aaKnown RBP13.8□□□□□ -0.2
H3F3C-201ENST00000340398 SIGLECL1Q8N7X8 197 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 LRRC75AQ8NAA5 344 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 ST7LQ8TDW4 575 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 C10orf82Q8WW14 230 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 STON2Q8WXE9 905 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 LRRC58Q96CX6 371 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 ZMYND19Q96E35 227 aaPredicted RBP13.8□□□□□ -0.2
H3F3C-201ENST00000340398 MAGEB18Q96M61 343 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 ZNF583Q96ND8 569 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
H3F3C-201ENST00000340398 STX18Q9P2W9 335 aaKnown RBP13.8□□□□□ -0.2
H3F3C-201ENST00000340398 HIF3AQ9Y2N7 669 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 NPTNQ9Y639 398 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 MEGF8Q7Z7M0 2845 aa13.8□□□□□ -0.2
H3F3C-201ENST00000340398 A0A1W2PPL8 197 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 NPIPB13A6NJU9 1138 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 NPIPB4C9JG80 1138 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 FXYD1O00168 92 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 CD55P08174 381 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 ADH4P08319 380 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 CST2P09228 141 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 LIPAP38571 399 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 YAP1P46937 504 aaKnown RBP13.79□□□□□ -0.2
H3F3C-201ENST00000340398 SEC61A1P61619 476 aaKnown RBP13.79□□□□□ -0.2
H3F3C-201ENST00000340398 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 SF3A3Q12874 501 aaKnown RBP eCLIP13.79□□□□□ -0.2
H3F3C-201ENST00000340398 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 TAF11Q15544 211 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 CYBRD1Q53TN4 286 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 OTPQ5XKR4 325 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 TREML1Q86YW5 311 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 DEFB108BQ8NET1 73 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 OR51A7Q8NH64 312 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 BPIFA2Q96DR5 249 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 TPD52L3Q96J77 140 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 ALG12Q9BV10 488 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 EMC7Q9NPA0 242 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 CYSLTR2Q9NS75 346 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 RHCGQ9UBD6 479 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 A4GNTQ9UNA3 340 aa13.79□□□□□ -0.2
H3F3C-201ENST00000340398 TRAV27A0A087WT01 109 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 H7C1C5 153 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 TIMM8AO60220 97 aaPredicted RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 EDF1O60869 148 aaKnown RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 FOXH1O75593 365 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 THRBP10828 461 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 KDELR2P33947 212 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 GUCA1AP43080 201 aaPredicted RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 LCN6P62502 163 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 FHL1Q13642 323 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 KLF17Q5JT82 389 aaPredicted RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 UNQ6126/PRO20091Q6UXV3 157 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 Q6ZR03 302 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 TAF15Q92804 592 aaKnown RBP eCLIP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 SH3GL1Q99961 368 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 POLR2J2Q9GZM3 115 aaKnown RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 POLR2J3Q9H1A7 115 aaKnown RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 NTN4Q9HB63 628 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 TMEM106BQ9NUM4 274 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 GMPR2Q9P2T1 348 aaKnown RBP13.78□□□□□ -0.2
H3F3C-201ENST00000340398 ZNF69Q9UC07 566 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 STARD10Q9Y365 291 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 SNX13Q9Y5W8 968 aa13.78□□□□□ -0.2
H3F3C-201ENST00000340398 J3KTA2 159 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 ARHGDIAP52565 204 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 PCBD1P61457 104 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 ST3GAL3Q11203 375 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 ZNF154Q13106 437 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 LRRC23Q53EV4 343 aaPredicted RBP13.77□□□□□ -0.21
H3F3C-201ENST00000340398 METTL21CQ5VZV1 264 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 FOXL2NBQ6ZUU3 175 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 OR2Z1Q8NG97 314 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 OR8J3Q8NGG0 315 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 SLC7A6Q92536 515 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 CMBLQ96DG6 245 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 DIRC2Q96SL1 478 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 PATZ1Q9HBE1 687 aaKnown RBP13.77□□□□□ -0.21
H3F3C-201ENST00000340398 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
H3F3C-201ENST00000340398 PURGQ9UJV8 347 aaKnown RBP13.77□□□□□ -0.21
H3F3C-201ENST00000340398 SOX21Q9Y651 276 aaPredicted RBP13.77□□□□□ -0.21
H3F3C-201ENST00000340398 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 TMPRSS2O15393 492 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 ICMTO60725 284 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 KRT34O76011 436 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 ABHD16AO95870 558 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 IFNA14P01570 189 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 IGHMP01871 453 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 HKR1P10072 659 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 MSR1P21757 451 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 SLC6A9P48067 706 aa13.76□□□□□ -0.21
H3F3C-201ENST00000340398 ERFP50548 548 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms