RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 AIMP2Q13155 320 aaKnown RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 FZD2Q14332 565 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 SLC36A2Q495M3 483 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 STEAP1BQ6NZ63 245 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 GKN2Q86XP6 184 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TOMM40LQ969M1 308 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 ARL5BQ96KC2 179 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 RBP7Q96R05 134 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 TRAF4Q9BUZ4 470 aaPredicted RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 RBM24Q9BX46 236 aaKnown RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 POFUT1Q9H488 388 aa10.81□□□□□ -0.68
USP1-201ENST00000339950 PRMT8Q9NR22 394 aaPredicted RBP10.81□□□□□ -0.68
USP1-201ENST00000339950 PCNX1Q96RV3 2341 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 A0A087WUJ7 227 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 MED19A0JLT2 244 aaPredicted RBP10.8□□□□□ -0.68
USP1-201ENST00000339950 FAM221AA4D161 298 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 RAB19A4D1S5 217 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 AIPO00170 330 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 TRAPPC6AO75865 159 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 LIMK1P53667 647 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 TNK1Q13470 666 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 CD276Q5ZPR3 534 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 SLC25A24Q6NUK1 477 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 STEAP2Q8NFT2 490 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 OR4K17Q8NGC6 315 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 SMIM4Q8WVI0 70 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 DAZLQ92904 295 aaKnown RBP10.8□□□□□ -0.68
USP1-201ENST00000339950 STACQ99469 402 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 C12orf57Q99622 126 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 LYRM4Q9HD34 91 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 NTMQ9P121 344 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 GMEB2Q9UKD1 530 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 OR5K4A6NMS3 321 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 CRTAPO75718 401 aaPredicted RBP10.8□□□□□ -0.68
USP1-201ENST00000339950 IGF2P01344 180 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 NPY4RP50391 375 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 ZDHHC12Q96GR4 267 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 LCORQ96JN0 433 aaPredicted RBP10.8□□□□□ -0.68
USP1-201ENST00000339950 ZNF304Q9HCX3 659 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 A0A0B4J2A0 478 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 FBXO24O75426 580 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 CLRN1P58418 232 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 ZNF117Q03924 483 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 C14orf28Q4W4Y0 310 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 STPG1Q5TH74 334 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 FAM199XQ6PEV8 388 aaPredicted RBP10.8□□□□□ -0.68
USP1-201ENST00000339950 CD200R1LQ6Q8B3 271 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 LRRC46Q96FV0 321 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 SLC41A2Q96JW4 573 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 SHPKQ9UHJ6 478 aa10.8□□□□□ -0.68
USP1-201ENST00000339950 THSD7BQ9C0I4 1608 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 C2CD4DB7Z1M9 353 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 E9PQ18 207 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 FOXS1O43638 330 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 SC5DO75845 299 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 DRD1P21728 446 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 FXYD4P59646 89 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 IL13RA1P78552 427 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 FOXK1P85037 733 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 GLO1Q04760 184 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 TMEM176BQ3YBM2 270 aaPredicted RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 EXOSC6Q5RKV6 272 aaKnown RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 SLC25A30Q5SVS4 291 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 TSPAN32Q96QS1 320 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 MMP25Q9NPA2 562 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 PPP4R1LQ9P1A2 415 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 ST6GALNAC2Q9UJ37 374 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 TMEM82A0PJX8 343 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 GNB3P16520 340 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 GK2Q14410 553 aaPredicted RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 ZNF74Q16587 644 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 IGSF11Q5DX21 431 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 MUC20Q8N307 709 aaPredicted RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 STOML3Q8TAV4 291 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 PHOSPHO2Q8TCD6 241 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 HRH4Q9H3N8 390 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 SPTY2D1-AS1A0A0U1RR47 76 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 hCG_1807616A0A1W2PRN6 198 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 ACSM4P0C7M7 580 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 HTR2CP28335 458 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 SDHAP31040 664 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 DLX5P56178 289 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 DCAF12L2Q5VW00 463 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 RAET1LQ5VY80 246 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 RNLSQ5VYX0 342 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 PWWP2BQ6NUJ5 590 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 GTPBP8Q8N3Z3 284 aaPredicted RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 C12orf45Q8N5I9 185 aaPredicted RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 VSTM2LQ96N03 204 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 RTN4RQ9BZR6 473 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 INPP5EQ9NRR6 644 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 MRPS18AQ9NVS2 196 aaKnown RBP10.79□□□□□ -0.68
USP1-201ENST00000339950 TMEM14AQ9Y6G1 99 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 FANCMQ8IYD8 2048 aa10.79□□□□□ -0.68
USP1-201ENST00000339950 TRBV11-1A0A0K0K1C0 115 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 GABARAPH6UMI1 98 aa10.78□□□□□ -0.68
USP1-201ENST00000339950 ADAM10O14672 748 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms