RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GJE1A6NN92 205 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 SMAD9O15198 467 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 NKX2-8O15522 239 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 ATF1P18846 271 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 APEX1P27695 318 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 P2RY14Q15391 338 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 PCK2Q16822 640 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 ZNF433Q8N7K0 673 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 OR9K2Q8NGE7 335 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 NAA11Q9BSU3 229 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 UGT2A1Q9Y4X1 527 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 LINC00854A0A1B0GVQ3 168 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 TMEM212A6NML5 194 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM166BA8MTA8 275 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM25AB3EWG3 89 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM25CB3EWG5 89 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM25GB3EWG6 89 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 CXCL13O43927 109 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 EVX1P49640 407 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 CLDN15P56746 228 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 CARD18P57730 90 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 PYDC2Q56P42 97 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 TEX30Q5JUR7 227 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 PHYHD1Q5SRE7 291 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 SLC25A47Q6Q0C1 308 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 SAMD12Q8N8I0 201 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 KCNE4Q8WWG9 221 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 FAM210AQ96ND0 272 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 GFI1Q99684 422 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 CCDC32Q9BV29 185 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 CLEC4AQ9UMR7 237 aa19.92■□□□□ 0.78
PDLIM2-203ENST00000339162 AQP8O94778 261 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 HRGP04196 525 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 EPXP11678 715 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 POU3F2P20265 443 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 RASGEF1BQ0VAM2 473 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 HIST3H3Q16695 136 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 TRILQ7L0X0 811 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 HAVCR2Q8TDQ0 301 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 ACOT12Q8WYK0 555 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 ROBO4Q8WZ75 1007 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 COL25A1Q9BXS0 654 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 EMC9Q9Y3B6 208 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 GVINP1Q7Z2Y8 2422 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 ISPDA4D126 451 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 HNRNPCP07910 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 SNRPBP14678 240 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 CD82P27701 267 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 SELENOPP49908 381 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 NOVA1P51513 510 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 RAC3P60763 192 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 HDDC2Q7Z4H3 204 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 OR5H6Q8NGV6 325 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 TRMT10AQ8TBZ6 339 aaKnown RBP19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 TMEM106AQ96A25 262 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 BRD7Q9NPI1 651 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 CYB5R1Q9UHQ9 305 aa19.91■□□□□ 0.78
PDLIM2-203ENST00000339162 TRBV5-5A0A0J9YX44 114 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 NOTOA8MTQ0 251 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 EIF4EP06730 217 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 AGFG1P52594 562 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 GFRA1P56159 465 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 IL18Q14116 193 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 XKRXQ6PP77 449 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 GALNTL5Q7Z4T8 443 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 ZIC4Q8N9L1 334 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 OR6N1Q8NGY5 312 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 OR10D3Q8NH80 312 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 OR2M2Q96R28 347 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 OR2B2Q9GZK3 357 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 ZNF703Q9H7S9 590 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 POLR1DQ9Y2S0 133 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 HSPB2A8KAH6 182 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 VAMP5O95183 116 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 IL7P13232 177 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 MAGEA5P43359 124 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 TAB1Q15750 504 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 HSPB2Q16082 182 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 FDX2Q6P4F2 183 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 IL17RDQ8NFM7 739 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 GPR148Q8TDV2 347 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 TTTY12Q9BZ98 90 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 GLTPQ9NZD2 209 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 LHFPL6Q9Y693 200 aa19.9■□□□□ 0.78
PDLIM2-203ENST00000339162 TLX3O43711 291 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 SSX4O60224 188 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 ZNF254O75437 659 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 CSNK1A1P48729 337 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 HES5Q5TA89 166 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 CFAP77Q6ZQR2 320 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 ESPNLQ6ZVH7 1005 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 OR10S1Q8NGN2 331 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 TSEN15Q8WW01 171 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 PHYHIPQ92561 330 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 SLAMF6Q96DU3 332 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 ZNF845Q96IR2 970 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 EXTL2Q9UBQ6 330 aa19.89■□□□□ 0.77
PDLIM2-203ENST00000339162 TRAV8-7A0A075B6U6 113 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 H2BFMP0C1H6 154 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 SPNP16150 400 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms