RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ERFEQ4G0M1 354 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 RNASE12Q5GAN4 147 aaKnown RBP3.79□□□□□ -1.8
NEDD4-201ENST00000338963 CRB2Q5IJ48 1285 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 LRRC73Q5JTD7 316 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 FRRS1Q6ZNA5 592 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 LYG2Q86SG7 212 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 RGL4Q8IZJ4 473 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 MDGA1Q8NFP4 955 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 CLEC4DQ8WXI8 215 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 LINC01599Q8WXQ3 324 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 DYRK2Q92630 601 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 MS4A10Q96PG2 267 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 MED10Q9BTT4 135 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 Q9N2K0 584 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 SLC2A8Q9NY64 477 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 USP36Q9P275 1121 aaKnown RBP3.79□□□□□ -1.8
NEDD4-201ENST00000338963 AMDHD2Q9Y303 409 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 IGHA1P01876 353 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 PRH1P02810 166 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 SOD3P08294 240 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 ANXA4P09525 319 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-201ENST00000338963 CTSEP14091 401 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 GLIPR1P48060 266 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 NPBWR2P48146 333 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 CRISP3P54108 245 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 UCP2P55851 309 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 Q5PR19 223 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 DPPA3Q6W0C5 159 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 VSIG10LQ86VR7 867 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM192Q8IY95 271 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 ZDHHC22Q8N966 263 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 OR4K14Q8NGD5 310 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 LENG9Q96B70 501 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 OR7D2Q96RA2 312 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 ABHD1Q96SE0 405 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 ELL3Q9HB65 397 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-201ENST00000338963 UTS2RQ9UKP6 389 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 FOXJ3Q9UPW0 622 aa3.79□□□□□ -1.8
NEDD4-201ENST00000338963 YJEFN3A6XGL0 299 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 PEX12O00623 359 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 FGF10O15520 208 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 PCDH7O60245 1069 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 TXNDC12O95881 172 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 LIPCP11150 499 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CD99P14209 185 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 IL12BP29460 328 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 WASP42768 502 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SLC37A1P57057 533 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SLAQ13239 276 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 BEX5Q5H9J7 111 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 Q6ZPB1 254 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 Q6ZVU0 165 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SERPINA9Q86WD7 417 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 BATF2Q8N1L9 274 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SYS1Q8N2H4 156 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 ERGIC1Q969X5 290 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 MIB2Q96AX9 1013 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 NTNG2Q96CW9 530 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 RBMXL1Q96E39 390 aaKnown RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF75AQ96N20 296 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 AQP10Q96PS8 301 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 OR2V2Q96R30 315 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SYT3Q9BQG1 590 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 BOCQ9BWV1 1114 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CDH20Q9HBT6 801 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 MYOZ2Q9NPC6 264 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SIDT1Q9NXL6 827 aaKnown RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 OR51B2Q9Y5P1 312 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CD8B2A6NJW9 211 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 DCTN6O00399 190 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 LANCL1O43813 399 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 KCNK5O95279 499 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 ABHD16AO95870 558 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 LAMP1P11279 417 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CXCR3P49682 368 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 UBE2NP61088 152 aaKnown RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 PAX2Q02962 417 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 MESP2Q0VG99 397 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SNAI3Q3KNW1 292 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 COX19Q49B96 90 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 SYT14P1Q58G82 188 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CPTPQ5TA50 214 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 NHLRC1Q6VVB1 395 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 TTLL10Q6ZVT0 673 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 NIT1Q86X76 327 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 OR52L1Q8NGH7 329 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 AUTS2Q8WXX7 1259 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 ZCCHC14Q8WYQ9 949 aaKnown RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 HSD17B8Q92506 261 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 C12orf42Q96LP6 360 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CIB3Q96Q77 187 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 TAAR6Q96RI8 345 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 MRPL27Q9P0M9 148 aaKnown RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 RBPJLQ9UBG7 517 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 FOXD3Q9UJU5 478 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-201ENST00000338963 PPLO60437 1756 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 CTAG2O75638 210 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 OR6A2O95222 327 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 IL2RAP01589 272 aa3.78□□□□□ -1.8
NEDD4-201ENST00000338963 HSPB1P04792 205 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms