RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 METTL17Q9H7H0 456 aaPredicted RBP7.91□□□□□ -1.14
SNCA-201ENST00000336904 PILRBQ9UKJ0 227 aa7.91□□□□□ -1.14
SNCA-201ENST00000336904 MRPS18BQ9Y676 258 aaKnown RBP7.91□□□□□ -1.14
SNCA-201ENST00000336904 DOCK7Q96N67 2140 aa7.91□□□□□ -1.14
SNCA-201ENST00000336904 TRBV5-5A0A0J9YX44 114 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 A0A1W2PQD3 144 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 FAM172BPA6NC97 362 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 VSTM2BA6NLU5 285 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 TEX46H3BTG2 121 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 PDCD5O14737 125 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 ZNF254O75437 659 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 HRGP04196 525 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 RFC3P40938 356 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 PMS2CLQ68D20 193 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 FAM198BQ6UWH4 519 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 C17orf107Q6ZR85 190 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 LUZP2Q86TE4 346 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 NAA40Q86UY6 237 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 ASB5Q8WWX0 329 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 ASB10Q8WXI3 467 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 C11orf40Q8WZ69 217 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 HGDQ93099 445 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 FGGYQ96C11 551 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 MRPL48Q96GC5 212 aaKnown RBP7.9□□□□□ -1.14
SNCA-201ENST00000336904 LRFN5Q96NI6 719 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 SNX18Q96RF0 628 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 UCN2Q96RP3 112 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 PTGES2Q9H7Z7 377 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 SERINC1Q9NRX5 453 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.14
SNCA-201ENST00000336904 NCOA6Q14686 2063 aaPredicted RBP7.9□□□□□ -1.14
SNCA-201ENST00000336904 NBEAQ8NFP9 2946 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 EXPH5Q8NEV8 1989 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 TMEM212A6NML5 194 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 RER1O15258 196 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 CCL3P10147 92 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 PTGDSP41222 190 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 PITPNAQ00169 270 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 HSF2Q03933 536 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 NKPD1Q17RQ9 610 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 ISXQ2M1V0 245 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 TMEM225Q6GV28 225 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 H1FNTQ75WM6 255 aaPredicted RBP7.9□□□□□ -1.14
SNCA-201ENST00000336904 ZNF227Q86WZ6 799 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.9□□□□□ -1.14
SNCA-201ENST00000336904 LRRC18Q8N456 261 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 OR4S1Q8NGB4 309 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 OR5D18Q8NGL1 313 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 OR1J4Q8NGS1 313 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 OR52N5Q8NH56 324 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 ADAMTS14Q8WXS8 1223 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 EDAQ92838 391 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 FAM3DQ96BQ1 224 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 CHRNA10Q9GZZ6 450 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 ZNF160Q9HCG1 818 aa7.9□□□□□ -1.14
SNCA-201ENST00000336904 FARSAQ9Y285 508 aaKnown RBP7.9□□□□□ -1.14
SNCA-201ENST00000336904 A0A0G2JMM0 328 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 A0A1W2PPB8 328 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 A0A1W2PRS3 328 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ANKUB1A6NFN9 424 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 KIR3DP1A8MWS1 328 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZNF780AO75290 641 aaPredicted RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 H2BFMP0C1H6 154 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 DNASE1L1P49184 302 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 BCL2A1Q16548 175 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 C2orf68Q2NKX9 166 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 PLPPR5Q32ZL2 321 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 EMC4Q5J8M3 183 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 RABEPKQ7Z6M1 372 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 SLC43A2Q8N370 569 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TMEM105Q8N8V8 129 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 WDSUB1Q8N9V3 476 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR4K17Q8NGC6 315 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR8H1Q8NGG4 311 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TMEM234Q8WY98 164 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 SCMH1Q96GD3 660 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 CHST6Q9GZX3 395 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 EVA1AQ9H8M9 152 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 CHST11Q9NPF2 352 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 B3GAT1Q9P2W7 334 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ASH2LQ9UBL3 628 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 WIF1Q9Y5W5 379 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 DCHS1Q96JQ0 3298 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TMEM272A0A1B0GTI8 110 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 TMEM235A6NFC5 223 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 LIPT2A6NK58 231 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 PYCARD-AS1I3L0S3 204 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 GPR171O14626 319 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 NOS1APO75052 506 aaPredicted RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 CTAG2O75638 210 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 MT-ATP6P00846 226 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 CD3DP04234 171 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 GTF2F2P13984 249 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ABOP16442 354 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 OTX2P32243 289 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 EGR3Q06889 387 aa7.89□□□□□ -1.15
SNCA-201ENST00000336904 ZNF385CQ66K41 422 aaPredicted RBP7.89□□□□□ -1.15
SNCA-201ENST00000336904 OR4D6Q8NGJ1 314 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms