RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
SYNE3-201ENST00000334258 A0A0B4J2A0 478 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 DCDC2BA2VCK2 349 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 FITM1A5D6W6 292 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 TMEM212A6NML5 194 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 DCTN6O00399 190 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 GPANK1O95872 356 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 CD8AP01732 235 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 H2AFB1P0C5Y9 115 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 NFYBP25208 207 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 PRPS1P60891 318 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 IL13RA1P78552 427 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF345Q14585 488 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF684Q5T5D7 378 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 FHL5Q5TD97 284 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 BIVMQ86UB2 503 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 GPX8Q8TED1 209 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 RNF166Q96A37 237 aaPredicted RBP12.42□□□□□ -0.42
SYNE3-201ENST00000334258 RAB7BQ96AH8 199 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 CMKLR1Q99788 373 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 SHPKQ9UHJ6 478 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 AKR1C4P17516 323 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 PCP4P48539 62 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 ENPP2Q13822 863 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
SYNE3-201ENST00000334258 RXFP4Q8TDU9 374 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 NMNAT2Q9BZQ4 307 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 WDR76Q9H967 626 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 GRHPRQ9UBQ7 328 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 MRPS2Q9Y399 296 aaKnown RBP12.42□□□□□ -0.42
SYNE3-201ENST00000334258 A0A1W2PP55 124 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 CTSVO60911 334 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 KAT7O95251 611 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 PGAM2P15259 253 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 HYAL1Q12794 435 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 GAB4Q2WGN9 574 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 ALG10Q5BKT4 473 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 GLYATL3Q5SZD4 288 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 LPCAT3Q6P1A2 487 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 SLC35D2Q76EJ3 337 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 ABHD13Q7L211 337 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 MAMDC2Q7Z304 686 aaPredicted RBP12.42□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF584Q8IVC4 421 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 JAGN1Q8N5M9 183 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 HRH4Q9H3N8 390 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 C1orf198Q9H425 327 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 SLC27A6Q9Y2P4 619 aa12.42□□□□□ -0.42
SYNE3-201ENST00000334258 PQLC2LA1A4F0 135 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 SNRPEP62304 92 aaKnown RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RUNX3Q13761 415 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 NKAPLQ5M9Q1 402 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 MAP3K3Q99759 626 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 MICU1Q9BPX6 476 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 OR2S2Q9NQN1 319 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 CKLFQ9UBR5 152 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 CGGBP1Q9UFW8 167 aaPredicted RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 SLC22A13Q9Y226 551 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 FAM96BQ9Y3D0 163 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 C2orf16Q68DN1 1984 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 A0A087WV62 115 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 TMEM235A6NFC5 223 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 SLC25A4P12235 298 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RASGEF1BQ0VAM2 473 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RBM39Q14498 530 aaKnown RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 PRICKLE4Q2TBC4 344 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RNASE10Q5GAN6 216 aaKnown RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 VWA2Q5GFL6 755 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RPS4Y2Q8TD47 263 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RELTQ969Z4 430 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 PPP1R14AQ96A00 147 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 RERGQ96A58 199 aaPredicted RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 FOXRED1Q96CU9 486 aaPredicted RBP12.41□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF251Q9BRH9 671 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 TIMM29Q9BSF4 260 aa12.41□□□□□ -0.42
SYNE3-201ENST00000334258 A0A087WUJ7 227 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 SULT2B1O00204 365 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 SLC17A2O00624 439 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 GMFGO60234 142 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 CD14P08571 375 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 CD96P40200 585 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 NR0B1P51843 470 aaKnown RBP12.4□□□□□ -0.42
SYNE3-201ENST00000334258 TFF2Q03403 129 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 SMCO1Q147U7 214 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 EDAQ92838 391 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 PHB2Q99623 299 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 SELENOIQ9C0D9 397 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 ELOVL3Q9HB03 270 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 TRBV5-7A0A0A0MS05 114 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 DOK2O60496 412 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms