RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 DCTN3O75935 186 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 IGHV2-70P01814 119 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 SFTPBP07988 381 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 SBK2P0C263 348 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 HTR2AP28223 471 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 RPS5P46782 204 aaKnown RBP12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 NUDT2P50583 147 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 GZMMP51124 257 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 BPIFB3P59826 476 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 C1DQ13901 141 aaKnown RBP12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 CEACAM16Q2WEN9 425 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 KLHL22Q53GT1 634 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 FAM69AQ5T7M9 428 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 BTNL3Q6UXE8 466 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 HACD2Q6Y1H2 254 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 MICU2Q8IYU8 434 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 C10orf53Q8N6V4 93 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 OR6S1Q8NH40 331 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 TAMM41Q96BW9 452 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 ZNF837Q96EG3 531 aaPredicted RBP12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 ZNF583Q96ND8 569 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 ASPNQ9BXN1 380 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 DENND2DQ9H6A0 471 aaPredicted RBP12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 GAR1Q9NY12 217 aaKnown RBP12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 NPTNQ9Y639 398 aa12.36□□□□□ -0.43
CTHRC1-201ENST00000330295 A0A087WUJ7 227 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 A0A0B4J2E0 115 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 A0A1B0GX12 115 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 CD79AP11912 226 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 ZNF250P15622 560 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 ZNF43P17038 809 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 KDELR2P33947 212 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 GYS2P54840 703 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 PAX2Q02962 417 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 PIGFQ07326 219 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 ESCO2Q56NI9 601 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 FAM209AQ5JX71 171 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 EPHX4Q8IUS5 362 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 OR6T1Q8NGN1 323 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 VANGL1Q8TAA9 524 aaPredicted RBP12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 SYNPRQ8TBG9 265 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 ITPKCQ96DU7 683 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 MPP4Q96JB8 637 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 TMEM43Q9BTV4 400 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 POLR2J2Q9GZM3 115 aaKnown RBP12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 POLR2J3Q9H1A7 115 aaKnown RBP12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 TOR3AQ9H497 397 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 SH3GLB1Q9Y371 365 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 LYSTQ99698 3801 aa12.35□□□□□ -0.43
CTHRC1-201ENST00000330295 ZNF816-ZNF321PA0A0X1KG74 233 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 LCE6AA0A183 80 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 CPSF4LA6NMK7 179 aaKnown RBP12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 CHP2O43745 196 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 AKAP8O43823 692 aaKnown RBP12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 MT-ND5P03915 603 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 NQO1P15559 274 aaKnown RBP12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 P2RY4P51582 365 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 MNAT1P51948 309 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 SLC7A2P52569 658 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 CDH12P55289 794 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 LIPEQ05469 1076 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 ENTPD8Q5MY95 495 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 GPR157Q5UAW9 335 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 H1FNTQ75WM6 255 aaPredicted RBP12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 GPR32P1Q8NGA4 272 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 MYLK2Q9H1R3 596 aa12.34□□□□□ -0.43
CTHRC1-201ENST00000330295 ZNF99A8MXY4 864 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 F5H0A9 414 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 SLC43A1O75387 559 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 TSPAN9O75954 239 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 OR6A2O95222 327 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 IGHV4-59P01825 116 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 HIST1H2ABP04908 130 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 PTDSS1P48651 473 aaKnown RBP12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 TAS2R41P59536 307 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 PMS2P3Q13401 168 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 TMEM155Q4W5P6 130 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 CYBRD1Q53TN4 286 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 GDPGP1Q6ZNW5 385 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 HIST3H2AQ7L7L0 130 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 COMTD1Q86VU5 262 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 SLC15A3Q8IY34 581 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 GPR137CQ8N3F9 429 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 SCAIQ8N9R8 606 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 ADAMTS16Q8TE57 1224 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 HIST1H2ACQ93077 130 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 TAAR8Q969N4 342 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 TPD52L3Q96J77 140 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 OXGR1Q96P68 337 aa12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 DCLRE1CQ96SD1 692 aaKnown RBP12.33□□□□□ -0.44
CTHRC1-201ENST00000330295 KCTD14Q9BQ13 255 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms