RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 ANKRD10Q9NXR5 420 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 NOP16Q9Y3C1 178 aaKnown RBP10.75□□□□□ -0.69
SHMT2-201ENST00000328923 WIF1Q9Y5W5 379 aa10.75□□□□□ -0.69
SHMT2-201ENST00000328923 TGIF2-C20orf24A0A0A6YYL0 155 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 TRAV1-2A0A0B4J238 106 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 GGCTO75223 188 aaKnown RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ABLIM3O94929 683 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 PMS2P2O95744 297 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 IGHEP01854 428 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 LIPCP11150 499 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 EPHA1P21709 976 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 DPP4P27487 766 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 HTR1FP30939 366 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 TAS2R20P59543 309 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 RPS13P62277 151 aaKnown RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 PPP2CBP62714 309 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 PPP2CAP67775 309 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 SRSF4Q08170 494 aaKnown RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 LEMD1Q68G75 181 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 COMMD6Q7Z4G1 85 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 OR4C6Q8NH72 309 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 C2orf15Q8WU43 125 aaKnown RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 TMEM159Q96B96 161 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF775Q96BV0 537 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 TMEM169Q96HH4 297 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 TMEM19Q96HH6 336 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF607Q96SK3 696 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 C5orf42Q9H799 3197 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 J3QRE1 110 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 J3QW42 95 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 AMBPP02760 352 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ELFN1P0C7U0 828 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 BRS3P32247 399 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF585AQ6P3V2 769 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 OGFOD3Q6PK18 319 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 SSX7Q7RTT5 188 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 LRP11Q86VZ4 500 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 APCDD1Q8J025 514 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 MORN4Q8NDC4 146 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 OR13C2Q8NGS9 318 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 OR8S1Q8NH09 359 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF514Q96K75 400 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF426Q9BUY5 554 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 TPSD1Q9BZJ3 242 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 OR2AG1Q9H205 316 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 FCF1Q9Y324 198 aaKnown RBP10.74□□□□□ -0.69
SHMT2-201ENST00000328923 CSAG2Q9Y5P2 127 aa10.74□□□□□ -0.69
SHMT2-201ENST00000328923 COL6A3P12111 3177 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 DAPL1A0PJW8 107 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 GXYLT2A0PJZ3 443 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 CYB5BO43169 146 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 NTN1O95631 604 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 MAOAP21397 527 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 TSFMP43897 325 aaKnown RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 TFPI2P48307 235 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 RAB1AP62820 205 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 CHD3Q12873 2000 aaKnown RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 C1orf53Q5VUE5 145 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 YOD1Q5VVQ6 348 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 AGTRAPQ6RW13 159 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.694e-7■□□□□ 9.3
SHMT2-201ENST00000328923 OR10H4Q8NGA5 316 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 S100A16Q96FQ6 103 aaKnown RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 IGSF21Q96ID5 467 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SNX22Q96L94 193 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 GFI1Q99684 422 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 FNDC11Q9BVV2 318 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SYNPO2LQ9H987 977 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 MYOTQ9UBF9 498 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 KCNG2Q9UJ96 466 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 MTCH2Q9Y6C9 303 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 J3QLW9 94 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 RAMP1O60894 148 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 EFEMP2O95967 443 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 MT-ND5P03915 603 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 IL3P08700 152 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 GTF2F2P13984 249 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF19P17023 458 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 ITPKBP27987 946 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 DHRS2Q13268 280 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 ELOBQ15370 118 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 BATFQ16520 125 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SLC8B1Q6J4K2 584 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF705AQ6ZN79 300 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SZRD1Q7Z422 152 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SLC35E3Q7Z769 313 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 BIVMQ86UB2 503 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 C11orf42Q8N5U0 333 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SLC35G3Q8N808 338 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 DCAF4L2Q8NA75 395 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 TEX19Q8NA77 164 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 WDR34Q96EX3 536 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 C4orf36Q96KX1 117 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 PARP12Q9H0J9 701 aaKnown RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 SLC25A18Q9H1K4 315 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 TCEAL2Q9H3H9 227 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-201ENST00000328923 CNIH4Q9P003 139 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms