RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PLXDC1Q8IUK5 500 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 WDFY1Q8IWB7 410 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 MUC20Q8N307 709 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 NUDT22Q9BRQ3 303 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 NARFLQ9H6Q4 476 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 C12orf10Q9HB07 376 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 FARSAQ9Y285 508 aaKnown RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 RPS10-NUDT3A0A1W2PQS6 291 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 SLC17A2O00624 439 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 ZNF35P13682 527 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 AP2S1P53680 142 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 PNLIPRP2P54317 469 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 H2BFSP57053 126 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 FAM198BQ6UWH4 519 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 SEZ6L2Q6UXD5 910 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 GRINAQ7Z429 371 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 C17orf82Q86X59 251 aaPredicted RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 OR13C3Q8NGS6 347 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 ASB17Q8WXJ9 295 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 C8orf44Q96CB5 159 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 B3GNT4Q9C0J1 378 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 MRPS18BQ9Y676 258 aaKnown RBP15.64■□□□□ 0.09
COL9A1-201ENST00000320755 MTCH2Q9Y6C9 303 aa15.64■□□□□ 0.09
COL9A1-201ENST00000320755 LOC100509620A0A075B734 347 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 LOC101059948A0A1B0GTJ6 334 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 DXOO77932 396 aaKnown RBP15.63■□□□□ 0.09
COL9A1-201ENST00000320755 DUX1O43812 170 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 FADS1O60427 444 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 PIAS2O75928 621 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 CSF1P09603 554 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 HTR2CP28335 458 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 POU3F1Q03052 451 aaPredicted RBP15.63■□□□□ 0.09
COL9A1-201ENST00000320755 DCAF12L2Q5VW00 463 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 B3GNTL1Q67FW5 361 aaPredicted RBP15.63■□□□□ 0.09
COL9A1-201ENST00000320755 ARSKQ6UWY0 536 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 LRRC20Q8TCA0 184 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 C5orf34Q96MH7 638 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 COL4A2P08572 1712 aa15.63■□□□□ 0.09
COL9A1-201ENST00000320755 FRYLO94915 3013 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 IGKV1D-43A0A0B4J1Z2 117 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 A0A1B0GX78 115 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 A0A1W2PPL8 197 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 NPIPB7O75200 414 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 GIPP09681 153 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-201ENST00000320755 AKAIN1P0CW23 69 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 LIPCP11150 499 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 GLT8D1Q68CQ7 371 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 STEAP1BQ6NZ63 245 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 SPICQ8N5J4 248 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 ANGPTL6Q8NI99 470 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 MVB12AQ96EY5 273 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 TMEM185BQ9H7F4 350 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 RDH8Q9NYR8 311 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 PLSCR5A0PG75 271 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 NPIPA5E9PKD4 350 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 NXPH1P58417 271 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 RAP2BP61225 183 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 RNF4P78317 190 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 ALKAL2Q6UX46 152 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 TTC9Q92623 222 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 MED30Q96HR3 178 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 SLC41A2Q96JW4 573 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 GSX2Q9BZM3 304 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 NPIPA1Q9UND3 350 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 A0A1B0GTQ1 180 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 TMEM269A0A1B0GVZ9 245 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 P2RY10O00398 339 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 CPN1P15169 458 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 TEX30Q5JUR7 227 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 OGFOD3Q6PK18 319 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 C3P1Q6ZMU1 363 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.62■□□□□ 0.09
COL9A1-201ENST00000320755 OR52N5Q8NH56 324 aa15.62■□□□□ 0.09
COL9A1-201ENST00000320755 A0A1W2PQD3 144 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 IL5P05113 134 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 DLX5P56178 289 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SLC26A5P58743 744 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 NKPD1Q17RQ9 610 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 MOGAT2Q3SYC2 334 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SCGB2B2Q4G0G5 96 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SLC36A1Q7Z2H8 476 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 COQ8AQ8NI60 647 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 STT3BQ8TCJ2 826 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 FAM46BQ96A09 425 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 RADILQ96JH8 1075 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 TINAGL1Q9GZM7 467 aaPredicted RBP15.61■□□□□ 0.09
COL9A1-201ENST00000320755 ARL6Q9H0F7 186 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 TAS2R8Q9NYW2 309 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 VSX1Q9NZR4 365 aaPredicted RBP15.61■□□□□ 0.09
COL9A1-201ENST00000320755 LOC107986453A0A1B0GWG9 222 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SNRPGP15A8MWD9 76 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 TMEM127O75204 238 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SRFP11831 508 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 GNALP38405 381 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 CLLU1Q5K131 121 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SIGIRRQ6IA17 410 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 CATSPERDQ86XM0 798 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 SLC25A45Q8N413 288 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 ACBD4Q8NC06 268 aa15.61■□□□□ 0.09
COL9A1-201ENST00000320755 MCRIP1C9JLW8 97 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms