RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NPIPB4C9JG80 1138 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SULT2B1O00204 365 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 KLK2P20151 261 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 OTX2P32243 289 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 PTGS2P35354 604 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 EIF1P41567 113 aaKnown RBP6.76□□□□□ -1.33
IFT88-201ENST00000319980 EIF1AXP47813 144 aaKnown RBP6.76□□□□□ -1.33
IFT88-201ENST00000319980 CLDN20P56880 219 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 CARD17Q5XLA6 110 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SLC22A10Q63ZE4 541 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 FDX2Q6P4F2 183 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 S100A16Q96FQ6 103 aaKnown RBP6.76□□□□□ -1.33
IFT88-201ENST00000319980 NKX3-1Q99801 234 aaPredicted RBP6.76□□□□□ -1.33
IFT88-201ENST00000319980 AUNIPQ9H7T9 357 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SEC61A2Q9H9S3 476 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 NEK6Q9HC98 313 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 HPF1Q9NWY4 346 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 AHCTF1Q8WYP5 2266 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 FREM3P0C091 2139 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 KIF26BQ2KJY2 2108 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 RALGAPA1Q6GYQ0 2036 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 TRBV5-7A0A0A0MS05 114 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 A0A1W2PNV4 684 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 CENPXA8MT69 81 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 B4E171 279 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 INMT-MINDY4F8WBC2 141 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ORC5O43913 435 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ZNF43P17038 809 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ADH6P28332 368 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TSPAN7P41732 249 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 CLRN1P58418 232 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 RPS15P62841 145 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 CD83Q01151 205 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 RAET1LQ5VY80 246 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 FAM205BPQ63HN1 556 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 DBX2Q6ZNG2 339 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 SIAH3Q8IW03 269 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 GLB1L2Q8IW92 636 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 DND1Q8IYX4 353 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 ST7LQ8TDW4 575 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 SLC7A6Q92536 515 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 FYTTD1Q96QD9 318 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 MRPL13Q9BYD1 178 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 RANGRFQ9HD47 186 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 FANCFQ9NPI8 374 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 PISDQ9UG56 409 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TCFL5Q9UL49 500 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 DHDHQ9UQ10 334 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 RBMX2Q9Y388 322 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 ALG5Q9Y673 324 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TRAV6A0A075B6T7 132 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TMEM269A0A1B0GVZ9 245 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 PTHLHP12272 177 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 P2RY4P51582 365 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ART1P52961 327 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 MFAP5Q13361 173 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ANGPT1Q15389 498 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TMEM69Q5SWH9 247 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 NHLRC1Q6VVB1 395 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 RAB11FIP2Q7L804 512 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TIPARPQ7Z3E1 657 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 CATSPERDQ86XM0 798 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 OR10H5Q8NGA6 315 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 OR1J4Q8NGS1 313 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 SLC25A43Q8WUT9 341 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 ASB5Q8WWX0 329 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 C11orf40Q8WZ69 217 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ZBTB8AQ96BR9 441 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 SLC25A44Q96H78 314 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 CMTM3Q96MX0 182 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 NUDT15Q9NV35 164 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 MRPL15Q9P015 296 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 N6AMT1Q9Y5N5 214 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 KNTC1P50748 2209 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 A0A1W2PQ72 361 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TRAF3IP2O43734 574 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 AQP8O94778 261 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 IGHG1P01857 330 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 CD2P06729 351 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 H2BFMP0C1H6 154 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 JMJD7P0C870 316 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TMIGD3P0DMS9 266 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 CALCBP10092 127 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 SDHBP21912 280 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 GIFP27352 417 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 CDAP32320 146 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 BTCP35070 178 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 SNTB2Q13425 540 aaKnown RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 TOMM20Q15388 145 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 PCK2Q16822 640 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ZFP69Q49AA0 526 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 PLA1AQ53H76 456 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 THEM4Q5T1C6 240 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 B3GNTL1Q67FW5 361 aaPredicted RBP6.75□□□□□ -1.33
IFT88-201ENST00000319980 BAIAP2L2Q6UXY1 529 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 TMPPEQ6ZT21 453 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 OR51D1Q8NGF3 324 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms