RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 NFATC4Q14934 902 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 FAM76BQ5HYJ3 339 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 C9orf152Q5JTZ5 239 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 TRAPPC6BQ86SZ2 158 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 GAL3ST3Q96A11 431 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 C10orf90Q96M02 699 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 OR2A7Q96R45 310 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 ST6GALNAC5Q9BVH7 336 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 GAREM1Q9H706 876 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 CHRNA9Q9UGM1 479 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 C19orf53Q9UNZ5 99 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RFPL4AA6NLU0 287 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 SNRPGP15A8MWD9 76 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RFPL4AL1F8VTS6 287 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 XRCC3O43542 346 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RNGTTO60942 597 aaKnown RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 CPT2P23786 658 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 GPR18Q14330 331 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 MLC1Q15049 377 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 PEA15Q15121 130 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF658BQ4V348 819 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 YAF2Q8IY57 180 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 POMGNT2Q8NAT1 580 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 OR13C3Q8NGS6 347 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 OR11A1Q9GZK7 315 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 PURGQ9UJV8 347 aaKnown RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 P2RY10O00398 339 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 MED6O75586 246 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 KAT7O95251 611 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 PNPP00491 289 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 CISD3P0C7P0 127 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 NQO2P16083 231 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 PTGFRP43088 359 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 MEOX2P50222 304 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 AVL9Q8NBF6 648 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 OR1J4Q8NGS1 313 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 AKR1E2Q96JD6 320 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-201ENST00000318607 BIN3Q9NQY0 253 aa12.85□□□□□ -0.35
PABPC1-201ENST00000318607 AGR2O95994 175 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 WNT11O96014 354 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 ARG1P05089 322 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 CD2P06729 351 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 GP1BAP07359 652 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 MPGP29372 298 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 ADPRHP54922 357 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-201ENST00000318607 LINC00615Q96LM1 132 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-201ENST00000318607 GPER1Q99527 375 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 ENTPD2Q9Y5L3 495 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 URGCP-MRPS24S4R325 110 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 GPRIN2O60269 458 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
PABPC1-201ENST00000318607 GLCEO94923 617 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 CALCBP10092 127 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 CPN1P15169 458 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 MGMTP16455 207 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 RBM34P42696 430 aaKnown RBP12.84□□□□□ -0.35
PABPC1-201ENST00000318607 B2MP61769 119 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 RPL18Q07020 188 aaKnown RBP12.84□□□□□ -0.35
PABPC1-201ENST00000318607 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 FAM78AQ5JUQ0 283 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 C11orf87Q6NUJ2 197 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 OR1E3Q8WZA6 343 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 SEC61A2Q9H9S3 476 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 DNAJB12Q9NXW2 375 aaKnown RBP12.84□□□□□ -0.35
PABPC1-201ENST00000318607 RASL12Q9NYN1 266 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 UPB1Q9UBR1 384 aa12.84□□□□□ -0.35
PABPC1-201ENST00000318607 H0YIG0 161 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 BRINP1O60477 761 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.35
PABPC1-201ENST00000318607 CASRP41180 1078 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 ACAA2P42765 397 aaKnown RBP12.83□□□□□ -0.35
PABPC1-201ENST00000318607 RPS27AP62979 156 aaKnown RBP12.83□□□□□ -0.35
PABPC1-201ENST00000318607 UBA52P62987 128 aaKnown RBP12.83□□□□□ -0.35
PABPC1-201ENST00000318607 PSG6Q00889 435 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 ZP2Q05996 745 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 ZIC1Q15915 447 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 LY6G6FQ5SQ64 297 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 NCMAPQ5T1S8 102 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 SFT2D1Q8WV19 159 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 MMABQ96EY8 250 aaPredicted RBP12.83□□□□□ -0.35
PABPC1-201ENST00000318607 ZBP1Q9H171 429 aa12.83□□□□□ -0.35
PABPC1-201ENST00000318607 Q9N2J8 555 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms