RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ABHD12BQ7Z5M8 362 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 TMEM80Q96HE8 168 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 ERRFI1Q9UJM3 462 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 LHFPL6Q9Y693 200 aa13.5□□□□□ -0.25
PDLIM5-202ENST00000318007 EFCAB10A6NFE3 127 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 A8MXE2 369 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 RGS10O43665 173 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 CDK1P06493 297 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 GGTLC2Q14390 218 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 KLHL22Q53GT1 634 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 BEND4Q6ZU67 534 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC16A9Q7RTY1 509 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 OR1K1Q8NGR3 316 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 PLCXD1Q9NUJ7 323 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 GALNT8Q9NY28 637 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC5A6Q9Y289 635 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 PNMA8CA0A1B0GUJ8 204 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 RPL36A-HNRNPH2H7BZ11 118 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 AGFG2O95081 481 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 OR8G3PP0DMU2 310 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 GRNP28799 593 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF133P52736 654 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 MRPS34P82930 218 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 ENDOGQ14249 297 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 LRRN1Q6UXK5 716 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF433Q8N7K0 673 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 TSPAN14Q8NG11 270 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 AKR7LQ8NHP1 331 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 SLC7A6Q92536 515 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 MYDGFQ969H8 173 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 ZC3HAV1LQ96H79 300 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 MAP6Q96JE9 813 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 RNF121Q9H920 327 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 ISG20L2Q9H9L3 353 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 SIAEQ9HAT2 523 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 HAO2Q9NYQ3 351 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 IKZF2Q9UKS7 526 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 N6AMT1Q9Y5N5 214 aa13.49□□□□□ -0.25
PDLIM5-202ENST00000318007 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 FARS2O95363 451 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF32P17041 273 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 MYL12AP19105 171 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 CHRNB4P30926 498 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 POU4F2Q12837 409 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 NEDD8Q15843 81 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 TBRG1Q3YBR2 411 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 TP53I3Q53FA7 332 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 C4orf17Q53FE4 359 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 STAC2Q6ZMT1 411 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 CDC20BQ86Y33 519 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 OR2AJ1Q8NGZ0 328 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 OTOSQ8NHW6 89 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 ALG8Q9BVK2 526 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 DUSP21Q9H596 190 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 NOX3Q9HBY0 568 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF224Q9NZL3 707 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 CYB5R1Q9UHQ9 305 aa13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 GDF2Q9UK05 429 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 EXOGQ9Y2C4 368 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-202ENST00000318007 MSTNO14793 375 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 CCL2P13500 99 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 IL32P24001 234 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 HOXC12P31275 282 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF85Q03923 595 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 DOC2BQ14184 412 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 SFRP5Q5T4F7 317 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 OR7E24Q6IFN5 339 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 MRGPRGQ86SM5 289 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ACBD7Q8N6N7 88 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 SNX33Q8WV41 574 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 GATAD2BQ8WXI9 593 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 S100PBPQ96BU1 408 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ABHD6Q9BV23 337 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 BRD7Q9NPI1 651 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ERVK13-1Q9NX77 482 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 PLEK2Q9NYT0 353 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 CNOT2Q9NZN8 540 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 GNG8Q9UK08 70 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 J3QLW9 94 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 J3QRE1 110 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 MYL12BO14950 172 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 DOK2O60496 412 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 RPP14O95059 124 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 PTHP01270 115 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 HSMCR30P0CW71 290 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 ZNF19P17023 458 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 NPR2P20594 1047 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 CCNOP22674 350 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 BLVRAP53004 296 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 OR12D2P58182 307 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 CSNK2BP67870 215 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 GALK2Q01415 458 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 MED22Q15528 200 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 GABRA6Q16445 453 aa13.47□□□□□ -0.25
PDLIM5-202ENST00000318007 FAM27BQ5VT28 67 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms