RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RAD1O60671 282 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 ZNF354AO60765 605 aaPredicted RBP12.72□□□□□ -0.37
VRK3-201ENST00000316763 NPIPB7O75200 414 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 ZNF780AO75290 641 aaPredicted RBP12.72□□□□□ -0.37
VRK3-201ENST00000316763 CD82P27701 267 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 CLDN12P56749 244 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 GSG1Q2KHT4 349 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 C16orf47Q6ZP98 133 aaPredicted RBP12.72□□□□□ -0.37
VRK3-201ENST00000316763 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 OR52I2Q8NH67 350 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 OR8B4Q96RC9 309 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 SLCO1C1Q9NYB5 712 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 VSX1Q9NZR4 365 aaPredicted RBP12.72□□□□□ -0.37
VRK3-201ENST00000316763 MYOTQ9UBF9 498 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 KCNG2Q9UJ96 466 aa12.72□□□□□ -0.37
VRK3-201ENST00000316763 FARSAQ9Y285 508 aaKnown RBP12.72□□□□□ -0.37
VRK3-201ENST00000316763 SMLR1H3BR10 107 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 ACOT7O00154 380 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 PLPP3O14495 311 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 PRAF2O60831 178 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 PLGP00747 810 aaPredicted RBP12.71□□□□□ -0.37
VRK3-201ENST00000316763 IGHMP01871 453 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 NAGAP17050 411 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 SSPNQ14714 243 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 SLC17A1Q14916 467 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 ELFN2Q5R3F8 820 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 MTFR2Q6P444 385 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 KCTD18Q6PI47 426 aaPredicted RBP12.71□□□□□ -0.37
VRK3-201ENST00000316763 NDUFAF7Q7L592 441 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 PPP1R32Q7Z5V6 425 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 DTX1Q86Y01 620 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 SERPINA12Q8IW75 414 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 OR6S1Q8NH40 331 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 M1APQ8TC57 530 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
VRK3-201ENST00000316763 GIMAP1Q8WWP7 306 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 NKD1Q969G9 470 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 TMEM106AQ96A25 262 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 DNAJA3Q96EY1 480 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 C4orf45Q96LM5 186 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 GPR87Q9BY21 358 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 HRASLSQ9HDD0 168 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 RCE1Q9Y256 329 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 HSPB11Q9Y547 144 aa12.71□□□□□ -0.37
VRK3-201ENST00000316763 PCNX3Q9H6A9 2034 aa12.71□□□□□ -0.38
VRK3-201ENST00000316763 A0A1B0GVI7 797 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 C21orf140B9A014 251 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 SLC16A7O60669 478 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 PEX14O75381 377 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 MAS1P04201 325 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 ADRA2CP18825 462 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 PSMB1P20618 241 aaKnown RBP12.7□□□□□ -0.38
VRK3-201ENST00000316763 CDK2P24941 298 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 CRABP1P29762 137 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 PTH2RP49190 550 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 RPS18P62269 152 aaKnown RBP12.7□□□□□ -0.38
VRK3-201ENST00000316763 RPS15P62841 145 aaKnown RBP12.7□□□□□ -0.38
VRK3-201ENST00000316763 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 ZNF767PQ75MW2 155 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 ZNF679Q8IYX0 411 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 PRSS35Q8N3Z0 413 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 OR11H7Q8NGC8 314 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 THAP3Q8WTV1 239 aaPredicted RBP12.7□□□□□ -0.38
VRK3-201ENST00000316763 C20orf85Q9H1P6 137 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 A0A087WV48 116 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 A0A1B0GTH9 108 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 A6NIZ1 184 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 C17orf51A8MQB3 221 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 SSNA1O43805 119 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 GPANK1O95872 356 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 RPS27P42677 84 aaKnown RBP12.7□□□□□ -0.38
VRK3-201ENST00000316763 KIR3DL2P43630 455 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 RAP1BP61224 184 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 RAP1AP62834 184 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 TGIF1Q15583 401 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 MEP1BQ16820 701 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 COL28A1Q2UY09 1125 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 KRT77Q7Z794 578 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 ZNF431Q8TF32 576 aaPredicted RBP12.7□□□□□ -0.38
VRK3-201ENST00000316763 RNF138Q8WVD3 245 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 ST8SIA1Q92185 356 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 DEFB126Q9BYW3 111 aa12.7□□□□□ -0.38
VRK3-201ENST00000316763 NSG1A0A0A6YYJ2 146 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 LOC101059948A0A1B0GTJ6 334 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 SLC22A23A1A5C7 686 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 ANKUB1A6NFN9 424 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 ADAM10O14672 748 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 SPARCP09486 303 aa12.69□□□□□ -0.38
VRK3-201ENST00000316763 RIDAP52758 137 aaKnown RBP12.69□□□□□ -0.38
VRK3-201ENST00000316763 SUMO3P55854 103 aaPredicted RBP12.69□□□□□ -0.38
VRK3-201ENST00000316763 TAS2R20P59543 309 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms