RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CFDP00746 253 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 NPR2P20594 1047 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 MPLP40238 635 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 RGS19P49795 217 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 BIDP55957 195 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 MFGE8Q08431 387 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 AANATQ16613 207 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 HYAL4Q2M3T9 481 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 PLPPR5Q32ZL2 321 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 LGALSLQ3ZCW2 172 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 WDR38Q5JTN6 314 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 H1FNTQ75WM6 255 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 NUP54Q7Z3B4 507 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 SLC51BQ86UW2 128 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 MISPQ8IVT2 679 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 TMEM106AQ96A25 262 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 IGHV1-45A0A0A0MS14 117 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 TSPAN9O75954 239 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 LDOC1O95751 146 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 ADRA2CP18825 462 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 OTX2P32243 289 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 APOBEC1P41238 236 aaKnown RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 KIR3DL2P43630 455 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 DGCR2P98153 550 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 TAGLNQ01995 201 aaKnown RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 HSF2Q03933 536 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 PLA2G7Q13093 441 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 FCRLAQ7L513 359 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 TOMM5Q8N4H5 51 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 DTWD2Q8NBA8 298 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 GIMAP1Q8WWP7 306 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 MRPL48Q96GC5 212 aaKnown RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 SLC26A1Q9H2B4 701 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 LIN7BQ9HAP6 207 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 MRPL39Q9NYK5 338 aaKnown RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 C9J4A7 227 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 YKT6O15498 198 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 IFNA7P01567 189 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 MT-ND4P03905 459 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 CCL3P10147 92 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 COX6A1P12074 109 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 RAB14P61106 215 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 RPS15P62841 145 aaKnown RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 HSF1Q00613 529 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 PEAR1Q5VY43 1037 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 KRT77Q7Z794 578 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 SIAH3Q8IW03 269 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 OR4K17Q8NGC6 315 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 DDIT4LQ96D03 193 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 CACNG6Q9BXT2 260 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 CHIAQ9BZP6 476 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 TCF7L1Q9HCS4 588 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 UBQLN2Q9UHD9 624 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 FKBP7Q9Y680 259 aa11.12□□□□□ -0.63
RNF4-201ENST00000314289 CHCHD2Q9Y6H1 151 aaPredicted RBP11.12□□□□□ -0.63
RNF4-201ENST00000314289 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 RPS10-NUDT3A0A1W2PQS6 291 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 LNP1A1A4G5 178 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 C7orf66A4D0T2 115 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 OR4C45A6NMZ5 311 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
RNF4-201ENST00000314289 FCER2P06734 321 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 DUSP3P51452 185 aaPredicted RBP11.11□□□□□ -0.63
RNF4-201ENST00000314289 STAC2Q6ZMT1 411 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 OR11G2Q8NGC1 345 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 TSEN15Q8WW01 171 aaKnown RBP11.11□□□□□ -0.63
RNF4-201ENST00000314289 GAL3ST1Q99999 423 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 CENPMQ9NSP4 180 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 R4GN57 208 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 LIPT2A6NK58 231 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 GPRIN2O60269 458 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 RBMS1P29558 406 aaKnown RBP11.11□□□□□ -0.63
RNF4-201ENST00000314289 GLO1Q04760 184 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 MFSD13AQ14CX5 517 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 TOMM20Q15388 145 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 ST3GAL2Q16842 350 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 Q499Y3 187 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 B3GNTL1Q67FW5 361 aaPredicted RBP11.11□□□□□ -0.63
RNF4-201ENST00000314289 TMPRSS12Q86WS5 348 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 CMTM4Q8IZR5 234 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 TEX19Q8NA77 164 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 OR2M3Q8NG83 312 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 OR2T35Q8NGX2 323 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 SORCS2Q96PQ0 1159 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 CHST11Q9NPF2 352 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
RNF4-201ENST00000314289 SPATA2Q9UM82 520 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms