RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ASB1Q9Y576 335 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 DCCP43146 1447 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 HIST1H1CP16403 213 aaKnown RBP11.59□□□□□ -0.55
USP38-201ENST00000307017 MMP11P24347 488 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 OR4S1Q8NGB4 309 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 KCNK15Q9H427 330 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 TRIP11Q15643 1979 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 LOC100289279A0A1B0GTE1 492 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 TMEM212A6NML5 194 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 BMPR1BO00238 502 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ZNF623O75123 536 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 LY86O95711 162 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 ACKR3P25106 362 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 HRH1P35367 487 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 BMPR1AP36894 532 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 RDH5Q92781 318 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
USP38-201ENST00000307017 AKAP12Q02952 1782 aa11.59□□□□□ -0.55
USP38-201ENST00000307017 FZD9O00144 591 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 PHOX2AO14813 284 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 PNPP00491 289 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 CSF3P09919 207 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 GABREP78334 506 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 H3F3AP84243 136 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 SERTAD2Q14140 314 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 ACSM5Q6NUN0 579 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 CDH26Q8IXH8 852 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 SLC24A4Q8NFF2 622 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 SARGQ9BW04 601 aa11.58□□□□□ -0.55
USP38-201ENST00000307017 RFX2P48378 723 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 EMDP50402 254 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 VEZF1Q14119 521 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 GAMTQ14353 236 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 TBCEQ15813 527 aaPredicted RBP11.58□□□□□ -0.56
USP38-201ENST00000307017 HES3Q5TGS1 186 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 MFSD12Q6NUT3 480 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 ETFBKMTQ8IXQ9 262 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 ARL6IP6Q8N6S5 226 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 DEFB108AA8MXU0 73 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 CNMDO75829 334 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 GLAP06280 429 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 MMP12P39900 470 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 OR5I1Q13606 314 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 C15orf54Q8N8G6 183 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 ADAMTS14Q8WXS8 1223 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 TNFRSF12AQ9NP84 129 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 WIF1Q9Y5W5 379 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 SERINC4A6NH21 518 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 GPR137BO60478 399 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 HLA-HP01893 362 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 MBNL1Q9NR56 388 aaKnown RBP11.58□□□□□ -0.56
USP38-201ENST00000307017 C5orf49A4QMS7 147 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 MSMO1Q15800 293 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 LYSMD4Q5XG99 296 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 CATSPERDQ86XM0 798 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 DTWD2Q8NBA8 298 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 OR10V1Q8NGI7 309 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 GON7Q9BXV9 100 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 RYDENQ9NUL5 291 aaKnown RBP11.58□□□□□ -0.56
USP38-201ENST00000307017 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 UBE2L5PA0A1B0GUS4 154 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 PRPH2P23942 346 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 FCGR2CP31995 323 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 MRPL19P49406 292 aaKnown RBP11.58□□□□□ -0.56
USP38-201ENST00000307017 MFAP5Q13361 173 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 RBMS3Q6XE24 437 aaKnown RBP11.58□□□□□ -0.56
USP38-201ENST00000307017 TGIF2LXQ8IUE1 241 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 SLC22A13Q9Y226 551 aa11.58□□□□□ -0.56
USP38-201ENST00000307017 M0R1B8 84 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 ZNF749O43361 778 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 CD300CQ08708 224 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SPNS3Q6ZMD2 512 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 GCNT2Q8N0V5 402 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 LGI3Q8N145 548 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 TCEAL7Q9BRU2 100 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 RBFOX1Q9NWB1 397 aaKnown RBP11.57□□□□□ -0.56
USP38-201ENST00000307017 CNOT2Q9NZN8 540 aaKnown RBP11.57□□□□□ -0.56
USP38-201ENST00000307017 GOLT1BQ9Y3E0 138 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 OR7C2O60412 319 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 SLC25A35Q3KQZ1 300 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 VWA2Q5GFL6 755 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 TMPRSS11FQ6ZWK6 438 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 APH1BQ8WW43 257 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 UPRTQ96BW1 309 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 GEMIN2O14893 280 aaKnown RBP11.57□□□□□ -0.56
USP38-201ENST00000307017 APELAP0DMC3 54 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 TEAD1P28347 426 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 PRLHRP49683 370 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 TAF9Q16594 264 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 Q6ZRG5 221 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 OR56B1Q8NGI3 324 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 OR5M8Q8NGP6 311 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 OR13F1Q8NGS4 319 aa11.57□□□□□ -0.56
USP38-201ENST00000307017 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms