RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 A0A0B4J2E0 115 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 A0A1B0GX12 115 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 GNB3P16520 340 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 HOXA6P31267 233 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 GPR143P51810 404 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF550Q7Z398 422 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 COX14Q96I36 57 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 A0A087WV62 115 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 BRINP1O60477 761 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 NFYBP25208 207 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 AKT2P31751 481 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 POU4F2Q12837 409 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 ZIC1Q15915 447 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 GUCA2BQ16661 112 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 WDR38Q5JTN6 314 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 NUBPLQ8TB37 319 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 FGGYQ96C11 551 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 SLC41A2Q96JW4 573 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 AIFM2Q9BRQ8 373 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 SLC22A11Q9NSA0 550 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 PIPOXQ9P0Z9 390 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 CYB5R1Q9UHQ9 305 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 COA3Q9Y2R0 106 aaPredicted RBP13.18□□□□□ -0.3
PTPN9-201ENST00000306726 DAOP14920 347 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 TGIF1Q15583 401 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 MOGAT2Q3SYC2 334 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 SLC25A30Q5SVS4 291 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 GABRG1Q8N1C3 465 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 NPEPL1Q8NDH3 523 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 OR13H1Q8NG92 308 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 OR10H5Q8NGA6 315 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 ELP5Q8TE02 316 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 C10orf90Q96M02 699 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 LPAR4Q99677 370 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 POTEKPQ9BYX7 375 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF223Q9UK11 482 aaPredicted RBP13.18□□□□□ -0.3
PTPN9-201ENST00000306726 A0A1B0GUH1 482 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 SERINC4A6NH21 518 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 SHISA7A6NL88 538 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 HCKP08631 526 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 GABRA1P14867 456 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 S1PR1P21453 382 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF616Q08AN1 781 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
PTPN9-201ENST00000306726 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 RNF113BQ8IZP6 322 aaKnown RBP13.18□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF248Q8NDW4 579 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 GFI1Q99684 422 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 DNAJB12Q9NXW2 375 aaKnown RBP13.18□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF337Q9Y3M9 751 aa13.18□□□□□ -0.3
PTPN9-201ENST00000306726 A0A0A6YYH2 397 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 TCRBV21S2A2A0A5A6 115 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 A6NJ64 397 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 PLRG1O43660 514 aaKnown RBP13.17□□□□□ -0.3
PTPN9-201ENST00000306726 PRAF2O60831 178 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 GIPP09681 153 aaPredicted RBP13.17□□□□□ -0.3
PTPN9-201ENST00000306726 ASCL1P50553 236 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTPN9-201ENST00000306726 CLVS2Q5SYC1 327 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 TMPRSS11FQ6ZWK6 438 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 C12orf57Q99622 126 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 OR10A5Q9H207 317 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 ANKRD19PQ9H560 264 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF878C9JN71 531 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 NDUFB6O95139 128 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 NXPH3O95157 252 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 PRH1P02810 166 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 GIMD1P0DJR0 217 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 OR3A2P47893 321 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 VWA2Q5GFL6 755 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 H3F3CQ6NXT2 135 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 CD300LFQ8TDQ1 290 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 CCDC107Q8WV48 283 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 HAVCR1Q96D42 359 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 NXF5Q9H1B4 397 aaKnown RBP13.17□□□□□ -0.3
PTPN9-201ENST00000306726 PCDHB10Q9UN67 800 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 TMED7Q9Y3B3 224 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 C2orf74A8MZ97 194 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 ADAP1O75689 374 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 GLCEO94923 617 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 ID4P47928 161 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 DYRK1AQ13627 763 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 NFATC4Q14934 902 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 ADGRG3Q86Y34 549 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 KLHL15Q96M94 604 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 NKX6-2Q9C056 277 aaPredicted RBP13.17□□□□□ -0.3
PTPN9-201ENST00000306726 KIR3DX1Q9H7L2 352 aa13.17□□□□□ -0.3
PTPN9-201ENST00000306726 CD14P08571 375 aa13.16□□□□□ -0.3
PTPN9-201ENST00000306726 RAB6AP20340 208 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms