RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZBTB46Q86UZ6 589 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR6V1Q8N148 313 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MUC15Q8N387 334 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR9Q1Q8NGQ5 310 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR6K6Q8NGW6 343 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 LILRB1Q8NHL6 650 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 C11orf40Q8WZ69 217 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CDADC1Q9BWV3 514 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR2H1Q9GZK4 316 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 BEX4Q9NWD9 120 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NDRG4Q9ULP0 352 aaKnown RBP9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 LAMP3Q9UQV4 416 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 AKAP6Q13023 2319 aa9.54□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ANKRD17O75179 2603 aaKnown RBP9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FAM171A2A8MVW0 826 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 E7EQL1 145 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 DCTN6O00399 190 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SURF4O15260 269 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SGCEO43556 437 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SMPD2O60906 423 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GPANK1O95872 356 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GAAP10253 952 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CD53P19397 219 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 STOMP27105 288 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 APEX1P27695 318 aaKnown RBP9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 FMO3P31513 532 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PYCR1P32322 319 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TTKP33981 857 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 HTR5AP47898 357 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 GDI2P50395 445 aaKnown RBP9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 BLVRAP53004 296 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SLC25A1P53007 311 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RAD23AP54725 363 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ADAM8P78325 824 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CDK5Q00535 292 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PSG4Q00888 419 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TEKQ02763 1124 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 SNAPC1Q16533 368 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MEP1BQ16820 701 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 DEFB113Q30KQ7 82 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 UGT2A3Q6UWM9 527 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF584Q8IVC4 421 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 NUP37Q8NFH4 326 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 OR2AJ1Q8NGZ0 328 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 AKR7LQ8NHP1 331 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 MBD6Q96DN6 1003 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ZNF75AQ96N20 296 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CIB1Q99828 191 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 C9orf16Q9BUW7 83 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 RIBC2Q9H4K1 309 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CA10Q9NS85 328 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 CBLN4Q9NTU7 201 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 PLEK2Q9NYT0 353 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 TVP23BQ9NYZ1 205 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 ASH2LQ9UBL3 628 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 EIF3KQ9UBQ5 218 aaKnown RBP9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 KCNG2Q9UJ96 466 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
CSPG4P1Y-201ENST00000306641 C5orf49A4QMS7 147 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 FAM183AA6NL82 134 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ANKRD65E5RJM6 399 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 EI24O14681 340 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 MITFO75030 526 aaPredicted RBP9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 MPZL1O95297 269 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SNAP29O95721 258 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SCG5P05408 212 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GYPBP06028 91 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ROS1P08922 2347 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 COX5BP10606 129 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 BMP4P12644 408 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CCL2P13500 99 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SPI1P17947 270 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ART1P52961 327 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RPS7P62081 194 aaKnown RBP9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PPP2R2BQ00005 443 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PTGES3Q15185 160 aaKnown RBP9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 KCNMB1Q16558 191 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TMEM236Q5W0B7 351 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ACSM5Q6NUN0 579 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF774Q6NX45 483 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ARL9Q6T311 187 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DTX2Q86UW9 622 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GJC3Q8NFK1 279 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SLC26A10Q8NG04 563 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR51L1Q8NGJ5 315 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TRMT61AQ96FX7 289 aaKnown RBP9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 WNT5BQ9H1J7 359 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR51V1Q9H2C8 321 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF442Q9H7R0 627 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CMAHPQ9Y471 501 aa9.52□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CELSR2Q9HCU4 2923 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TVP23AA6NH52 213 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZAR1LA6NP61 321 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LCKP06239 509 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SOD3P08294 240 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms