RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 OPN5Q6U736 354 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 TMED6Q8WW62 240 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 SLC30A3Q99726 388 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 EXTL1Q92935 676 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 BANF2Q9H503 90 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 BCL6P41182 706 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 ARHGEF39Q8N4T4 335 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 FUBP1Q96AE4 644 aaKnown RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 WDR76Q9H967 626 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 MEGF6O75095 1541 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 TMEM200CA6NKL6 621 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 CBR3O75828 277 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 GLCEO94923 617 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 GCGP01275 180 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 ABCD3P28288 659 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 Q6ZSR6 202 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 WDR83Q9BRX9 315 aaKnown RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 TPSD1Q9BZJ3 242 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 C5AR1P21730 350 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 CCL14Q16627 93 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 LEXMQ3ZCV2 418 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 LILRB1Q8NHL6 650 aaPredicted RBP12.35□□□□□ -0.43
TRIM56-201ENST00000306085 KLK4Q9Y5K2 254 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FMN2Q9NZ56 1722 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 G3V3Y1 287 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF141Q15928 474 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 TFAP2EQ6VUC0 442 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 ACOT4Q8N9L9 421 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FBLL1A6NHQ2 334 aaKnown RBP12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FAM72CH0Y354 149 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 SEMG1P04279 462 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 TPOP07202 933 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FAM72AQ5TYM5 149 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 PRAMEF20Q5VT98 475 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FAM72DQ6L9T8 149 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 OSTM1Q86WC4 334 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FAM72BQ86X60 149 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 STRAPQ9Y3F4 350 aaKnown RBP12.35□□□□□ -0.43
TRIM56-201ENST00000306085 GPR31O00270 319 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 PRSS56P0CW18 603 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 DRAM2Q6UX65 266 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 AAED1Q7RTV5 226 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 MUTYHQ9UIF7 546 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FCGR2CP31995 323 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 RPS16P62249 146 aaKnown RBP12.35□□□□□ -0.43
TRIM56-201ENST00000306085 PPP1R3BQ86XI6 285 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 NMNAT3Q96T66 252 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 CHST6Q9GZX3 395 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 SFXN1Q9H9B4 322 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 WNK2Q9Y3S1 2297 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 SPINK4O60575 86 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 ALOX5APP20292 161 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 NKAIN3Q8N8D7 197 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FBXO27Q8NI29 283 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 RALGAPA1Q6GYQ0 2036 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 NUDT19A8MXV4 375 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 WNT11O96014 354 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FBP1P09467 338 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 RAB1AP62820 205 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF561Q8N587 486 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 WDR61Q9GZS3 305 aaKnown RBP12.35□□□□□ -0.43
TRIM56-201ENST00000306085 LANCL2Q9NS86 450 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF541Q9H0D2 1346 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 CST2P09228 141 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 CPEP16870 476 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 SLC25A21Q9BQT8 299 aaPredicted RBP12.35□□□□□ -0.43
TRIM56-201ENST00000306085 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
TRIM56-201ENST00000306085 SYT5O00445 386 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 P2RY2P41231 377 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GLIPR1L1Q6UWM5 242 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ZFAND5O76080 213 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GALR1P47211 349 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 SLC6A11P48066 632 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 MAP2K6P52564 334 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 UTP23Q9BRU9 249 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 MED17Q9NVC6 651 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 PPRC1Q5VV67 1664 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 HMGN2P05204 90 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 HAPLN1P10915 354 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 RFX2P48378 723 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 SMN1Q16637 294 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ADRA2CP18825 462 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms