RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FZD7O75084 574 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 AQP8O94778 261 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 IL18Q14116 193 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 SGCAQ16586 387 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 ZNF239Q16600 458 aaKnown RBP12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC25A25Q6KCM7 469 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 OR2V1Q8NHB1 315 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 RNF128Q8TEB7 428 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 NTNG2Q96CW9 530 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 CCDC32Q9BV29 185 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC25A18Q9H1K4 315 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 C1orf198Q9H425 327 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 BRD7Q9NPI1 651 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 C14orf119Q9NWQ9 140 aa12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 PAIP2BQ9ULR5 123 aaKnown RBP12.92□□□□□ -0.34
SHCBP1-201ENST00000303383 ISPDA4D126 451 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 DNPH1O43598 174 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC19A2O60779 497 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 PSKH1P11801 424 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 SRMP19623 302 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 SRYQ05066 204 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 DCDC5Q6ZRR9 648 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 OR2B2Q9GZK3 357 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 EXO5Q9H790 373 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 EMC7Q9NPA0 242 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 ASCL3Q9NQ33 180 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 POLE4Q9NR33 117 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 GLTPQ9NZD2 209 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 MRPS18CQ9Y3D5 142 aaKnown RBP12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 NKX2-8O15522 239 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 APOA1P02647 267 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 FOSL1P15407 271 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 CDAP32320 146 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 PTGS2P35354 604 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 B3GALT5-AS1P59052 145 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 RPS11P62280 158 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 H3F3AP84243 136 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 THOC7Q6I9Y2 204 aaKnown RBP12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 CNIH2Q6PI25 160 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 RDH10Q8IZV5 341 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 SAMD12Q8N8I0 201 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 CHPT1Q8WUD6 406 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 THRSPQ92748 146 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 C4orf45Q96LM5 186 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 MIXL1Q9H2W2 232 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 PCSK5Q92824 1860 aa12.91□□□□□ -0.34
SHCBP1-201ENST00000303383 NOTOA8MTQ0 251 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 LINC01387J3KSC0 135 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 MAGEB1P43366 347 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 CCL11P51671 97 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 IFITM3Q01628 133 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 ROM1Q03395 351 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 WDR38Q5JTN6 314 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 TRILQ7L0X0 811 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 LUZP2Q86TE4 346 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC22A16Q86VW1 577 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 LYSMD2Q8IV50 215 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 OR10D3Q8NH80 312 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 ORAI1Q96D31 301 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 ZNF385AQ96PM9 386 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 RBM24Q9BX46 236 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 EMC9Q9Y3B6 208 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 ZNF254O75437 659 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 SP1P08047 785 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 HSD11B1P28845 292 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 INPP1P49441 399 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 FOXO1Q12778 655 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 STEAP3Q658P3 488 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 ROBO4Q8WZ75 1007 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 TTTY12Q9BZ98 90 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 TMEM269A0A1B0GVZ9 245 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 MAGEB3O15480 346 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC2A2P11168 524 aaPredicted RBP12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 MEOX1P50221 254 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 AGFG1P52594 562 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 TEX30Q5JUR7 227 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 XKRXQ6PP77 449 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 TRMT10AQ8TBZ6 339 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 TMEM106AQ96A25 262 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 SLAMF6Q96DU3 332 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 ULBP2Q9BZM5 246 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 CLEC4AQ9UMR7 237 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 SLC22A13Q9Y226 551 aa12.9□□□□□ -0.34
SHCBP1-201ENST00000303383 LINC00854A0A1B0GVQ3 168 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 CD2P06729 351 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 MAGEA5P43359 124 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF84P51523 738 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 MINDY2Q8NBR6 621 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 MAP6Q96JE9 813 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 PRRG4Q9BZD6 226 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF703Q9H7S9 590 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms