RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 A0A1W2PR80 420 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 OR5H1A6NKK0 313 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 SLC22A31A6NKX4 558 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 SLC1A7O00341 560 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 ZNF593O00488 134 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 CLDN14O95500 239 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 HLA-HP01893 362 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 HTR1AP08908 422 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 MRPL3P09001 348 aaKnown RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 CST2P09228 141 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 OR8G3PP0DMU2 310 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 IGFBP2P18065 325 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 ALOX5APP20292 161 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 NPR2P20594 1047 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 MSR1P21757 451 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 ZNF84P51523 738 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 SH3BGRP55822 239 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 TUBA1BP68363 451 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 TUBA4AP68366 448 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 SLC35A2P78381 396 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 MED21Q13503 144 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 CCDC92Q53HC0 331 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 ZNF684Q5T5D7 378 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 SLC18B1Q6NT16 456 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 CORO6Q6QEF8 472 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 CFAP77Q6ZQR2 320 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 TUBA1AQ71U36 451 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 BHLHA15Q7RTS1 189 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 SSX6Q7RTT6 188 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 DPY19L4Q7Z388 723 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 MYPOPQ86VE0 399 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 CDC20BQ86Y33 519 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 ZNF584Q8IVC4 421 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 LRRC18Q8N456 261 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 OR52I1Q8NGK6 324 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 ST7LQ8TDW4 575 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 RNASE6Q93091 150 aaKnown RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 S100PBPQ96BU1 408 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 RNFT2Q96EX2 444 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 Q96MT0 163 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 HDHD5Q9BXW7 423 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 DUSP21Q9H596 190 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 FGF20Q9NP95 211 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 KCNJ16Q9NPI9 418 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 H2AFY2Q9P0M6 372 aaPredicted RBP8.28□□□□□ -1.08
RFX3-201ENST00000302303 MYO18BQ8IUG5 2567 aa8.28□□□□□ -1.08
RFX3-201ENST00000302303 DOPEY1Q5JWR5 2465 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 CACNA1CQ13936 2221 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 C16orf97H3BN30 126 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 RER1O15258 196 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 IGHA1P01876 353 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 CCDC159P0C7I6 412 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 HOXB1P14653 301 aaPredicted RBP8.27□□□□□ -1.09
RFX3-201ENST00000302303 ZNF32P17041 273 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 ANOS1P23352 680 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 NAA10P41227 235 aaPredicted RBP8.27□□□□□ -1.09
RFX3-201ENST00000302303 CENPAP49450 140 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 ENTPD1P49961 510 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 BLVRAP53004 296 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 PSG4Q00888 419 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 ZNF85Q03923 595 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 PIGFQ07326 219 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 TAB1Q15750 504 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 OR7E24Q6IFN5 339 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 SLC16A9Q7RTY1 509 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.27□□□□□ -1.09
RFX3-201ENST00000302303 ERI1Q8IV48 349 aaKnown RBP8.27□□□□□ -1.09
RFX3-201ENST00000302303 LINC00346Q8IVM7 164 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 CPEB3Q8NE35 698 aaKnown RBP8.27□□□□□ -1.09
RFX3-201ENST00000302303 BPIFB6Q8NFQ5 453 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 OR51G2Q8NGK0 314 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 OTOSQ8NHW6 89 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 RFKQ969G6 155 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 WFIKKN1Q96NZ8 548 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 INTS14Q96SY0 518 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 WNT5BQ9H1J7 359 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 OR10A4Q9H209 315 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 NPAP1Q9NZP6 1156 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 ASH2LQ9UBL3 628 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 KCNG2Q9UJ96 466 aa8.27□□□□□ -1.09
RFX3-201ENST00000302303 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
RFX3-201ENST00000302303 A0A1W2PQL4 384 aaPredicted RBP8.26□□□□□ -1.09
RFX3-201ENST00000302303 CIB4A0PJX0 185 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 MAGEB4O15481 346 aaPredicted RBP8.26□□□□□ -1.09
RFX3-201ENST00000302303 AGFG2O95081 481 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 IGLV1-44P01699 117 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 HLA-DQA2P01906 255 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 PIPP12273 146 aaPredicted RBP8.26□□□□□ -1.09
RFX3-201ENST00000302303 C21orf33P30042 268 aaPredicted RBP8.26□□□□□ -1.09
RFX3-201ENST00000302303 RPS7P62081 194 aaKnown RBP8.26□□□□□ -1.09
RFX3-201ENST00000302303 ADAM8P78325 824 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 TGFBR3Q03167 851 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 RAB40BQ12829 278 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 KRTAP27-1Q3LI81 207 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 TIMM23BQ5SRD1 257 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 C17orf78Q8N4C9 275 aa8.26□□□□□ -1.09
RFX3-201ENST00000302303 ZNF485Q8NCK3 441 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms