RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OR5H14A6NHG9 310 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 EFCAB7A8K855 629 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 NPIPA2E9PIF3 369 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 NPIPA3F8WFD2 350 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 DCTN6O00399 190 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 ZIC2O95409 532 aaPredicted RBP12.07□□□□□ -0.48
CASC4-201ENST00000299957 IGF2P01344 180 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 IGHV3-9P01782 118 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 THY1P04216 161 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 RAB3AP20336 220 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 CRABP1P29762 137 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 SDHAP31040 664 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 EEF1A1P68104 462 aaKnown RBP12.07□□□□□ -0.48
CASC4-201ENST00000299957 DYRK1AQ13627 763 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 SEZ6L2Q6UXD5 910 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 UEVLDQ8IX04 471 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 ZNF595Q8IYB9 648 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 PXT1Q8NFP0 134 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 POMT2Q9UKY4 750 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 RABL2BQ9UNT1 228 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 C5orf42Q9H799 3197 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 LCATP04180 440 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 SLC26A5P58743 744 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 WDR38Q5JTN6 314 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.07□□□□□ -0.48
CASC4-201ENST00000299957 DND1Q8IYX4 353 aaKnown RBP12.07□□□□□ -0.48
CASC4-201ENST00000299957 OR51E1Q8TCB6 317 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 CDC6Q99741 560 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 SEMA6CQ9H3T2 930 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 PTGES2Q9H7Z7 377 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 ZNF160Q9HCG1 818 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 DZANK1Q9NVP4 752 aa12.07□□□□□ -0.48
CASC4-201ENST00000299957 TTC28Q96AY4 2481 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 CACNA1HO95180 2353 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 TRBV11-1A0A0K0K1C0 115 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 LOC100289279A0A1B0GTE1 492 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 TXNL1O43396 289 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 OIP5O43482 229 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 GNRHRP30968 328 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 UBE2IP63279 158 aaKnown RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 FGL1Q08830 312 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 PRICKLE4Q2TBC4 344 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 ZNF679Q8IYX0 411 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 SUMF1Q8NBK3 374 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 ZNF75AQ96N20 296 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 FBRSQ9HAH7 460 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 OR52A1Q9UKL2 312 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 ACAD8Q9UKU7 415 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 EXOGQ9Y2C4 368 aaKnown RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 RD3LP0DJH9 198 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 CDAP32320 146 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 TSFMP43897 325 aaKnown RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 C1orf140Q5VVS0 124 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 FCRL6Q6DN72 434 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 GPR139Q6DWJ6 353 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 DMKNQ6E0U4 476 aaPredicted RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 PAPD4Q6PIY7 484 aaKnown RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 OR51A2Q8NGJ7 313 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 OR5D14Q8NGL3 314 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 MARCH1Q8TCQ1 289 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 WNT2BQ93097 391 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 PRSS27Q9BQR3 290 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 AICDAQ9GZX7 198 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 LYRM4Q9HD34 91 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 MEGF11A6BM72 1044 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 SULT2B1O00204 365 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 DUX1O43812 170 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 OR4E1P0C645 316 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 RRASP10301 218 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 RPA2P15927 270 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 BLVRBP30043 206 aaPredicted RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 HNRNPKP61978 463 aaKnown RBP eCLIP12.06□□□□□ -0.48
CASC4-201ENST00000299957 VAMP2P63027 116 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 MLC1Q15049 377 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 PLA1AQ53H76 456 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 EIF5AL1Q6IS14 154 aaKnown RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 FBXO46Q6PJ61 603 aaPredicted RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 PXKQ7Z7A4 578 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 OR5T1Q8NG75 326 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 TAAR8Q969N4 342 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 NECAB3Q96P71 396 aaPredicted RBP12.06□□□□□ -0.48
CASC4-201ENST00000299957 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 ASH2LQ9UBL3 628 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 PCDHGA1Q9Y5H4 931 aa12.06□□□□□ -0.48
CASC4-201ENST00000299957 HSPA12AO43301 675 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 OR2T1O43869 369 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 MED6O75586 246 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 CD38P28907 300 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
CASC4-201ENST00000299957 ZIC1Q15915 447 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 ABHD6Q9BV23 337 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 RGCCQ9H4X1 137 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 CES1P1Q9UKY3 287 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 IGHA1P01876 353 aa12.05□□□□□ -0.48
CASC4-201ENST00000299957 DBHP09172 617 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms