RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 RABIFP47224 123 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 CLDN10P78369 228 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 GGNBP1Q5YKI7 109 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF787Q6DD87 383 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 C1QTNF3Q9BXJ4 246 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 UBQLN3Q9H347 655 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 CALCBP10092 127 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 SLC6A12P48065 614 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 TGFBR3Q03167 851 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 PDLIM5Q96HC4 596 aaKnown RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 APOOQ9BUR5 198 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 NDUFB11Q9NX14 153 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 PADI1Q9ULC6 663 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 A0A1B0GWA3 101 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 FOXE1O00358 373 aaPredicted RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 GSTP1P09211 210 aaKnown RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 FURINP09958 794 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 SULT1A2P50226 295 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 LYRM7Q5U5X0 104 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 NCR3LG1Q68D85 454 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 NAXDQ8IW45 347 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 BATF2Q8N1L9 274 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 CNEP1R1Q8N9A8 125 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 M0R2Z0 102 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 GATCO43716 136 aaKnown RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 OLFM2O95897 454 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 CPEP16870 476 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 ADRA2CP18825 462 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 GGTA1PQ4G0N0 100 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF547Q8IVP9 402 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 FAM71CQ8NEG0 241 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 LHX4Q969G2 390 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 TMEM129A0AVI4 362 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 H3BQ06 376 aaPredicted RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 MRPL33O75394 65 aaKnown RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 PRKRAO75569 313 aaKnown RBP13.65□□□□□ -0.22
SCN3B-201ENST00000299333 AQP8O94778 261 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 SELENBP1Q13228 472 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 ARRDC2Q8TBH0 407 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 OR5V1Q9UGF6 321 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 ADAM29Q9UKF5 820 aa13.65□□□□□ -0.22
SCN3B-201ENST00000299333 SFTA3P0C7M3 94 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SPP1P10451 314 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 DTYMKP23919 212 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 NTSR1P30989 418 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SLC19A1P41440 591 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 B2MP61769 119 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 FAM26EQ8N5C1 309 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF2Q9BSG1 426 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SOX7Q9BT81 388 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 LTB4R2Q9NPC1 389 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 MIOXQ9UGB7 285 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 MAN2B1O00754 1011 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 CA12O43570 354 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SEMA4FO95754 770 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 ACSM4P0C7M7 580 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SDHAP31040 664 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 EPHA5P54756 1037 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SPANXN5Q5MJ07 72 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PET117Q6UWS5 81 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SYT11Q9BT88 431 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SLC23A1Q9UHI7 598 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 GOLT1BQ9Y3E0 138 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SERINC4A6NH21 518 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 H2BFWTQ7Z2G1 175 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 DCXRQ7Z4W1 244 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PFN4Q8NHR9 129 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PLA2G12AQ9BZM1 189 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 RHOFQ9HBH0 211 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 RAB18Q9NP72 206 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 TAS2R4Q9NYW5 299 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PIGLQ9Y2B2 252 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 SLC5A10A0PJK1 596 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 CDK5Q00535 292 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF626Q68DY1 528 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 TMEM99Q8N816 258 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-201ENST00000299333 A0A0B4J203 849 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PIPP12273 146 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-201ENST00000299333 MAP2K6P52564 334 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PCBP4P57723 403 aaKnown RBP13.64□□□□□ -0.23
SCN3B-201ENST00000299333 GABREP78334 506 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 RUNX2Q13950 521 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 INPP5JQ15735 1006 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-201ENST00000299333 PHYHIPLQ96FC7 376 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 TPSD1Q9BZJ3 242 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 FLVCR1Q9Y5Y0 555 aa13.64□□□□□ -0.23
SCN3B-201ENST00000299333 GLTPD2A6NH11 291 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 FAM155AB1AL88 458 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 GPR31O00270 319 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms