RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 ROS1P08922 2347 aa10.58□□□□□ -0.72
HMGB2-201ENST00000296503 A0A1W2PRQ8 180 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 FABP3P05413 133 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 MAGEA2P43356 314 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SMIM11AP58511 58 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 VBP1P61758 197 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 DGCR6Q14129 220 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 TBRG1Q3YBR2 411 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ALG10Q5BKT4 473 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 FAM209AQ5JX71 171 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 RSBN1Q5VWQ0 802 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 TMEM108Q6UXF1 575 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 CCBE1Q6UXH8 406 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 OAFQ86UD1 273 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 WDFY1Q8IWB7 410 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 PIAS4Q8N2W9 510 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SLC7A13Q8TCU3 470 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 AKAP1Q92667 903 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF837Q96EG3 531 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SLC25A44Q96H78 314 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 TNFRSF13CQ96RJ3 184 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ULBP2Q9BZM5 246 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 DCSTAMPQ9H295 470 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SMURF2Q9HAU4 748 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 PLCXD1Q9NUJ7 323 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 MAGED1Q9Y5V3 778 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 HRNRQ86YZ3 2850 aaPredicted RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 CCDC168Q8NDH2 2452 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ABCD4O14678 606 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 GADD45GO95257 159 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 NR4A1P22736 598 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 PTAFRP25105 342 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 NR4A2P43354 598 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 GPR4P46093 362 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ART1P52961 327 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 CLRN1P58418 232 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SPIBQ01892 262 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SMUG1Q53HV7 270 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 SEZ6L2Q6UXD5 910 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ZDHHC21Q8IVQ6 265 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 KBTBD8Q8NFY9 601 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 PITX2Q99697 317 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 TMEM204Q9BSN7 226 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 IL1RAPQ9NPH3 570 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ABCB10Q9NRK6 738 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 GLTPQ9NZD2 209 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 ERVK-18Q9QC07 812 aa10.57□□□□□ -0.72
HMGB2-201ENST00000296503 NDRG4Q9ULP0 352 aaKnown RBP10.57□□□□□ -0.72
HMGB2-201ENST00000296503 TRAV27A0A087WT01 109 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 TRBV4-1A0A0J9YWV2 114 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CENPXA8MT69 81 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 SEMG1P04279 462 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 HOXB1P14653 301 aaPredicted RBP10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CD36P16671 472 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 S100A5P33763 92 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CAPZA2P47755 286 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 SLC9A3P48764 834 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 DAP3P51398 398 aaKnown RBP10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CTXN1P60606 82 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 NCS1P62166 190 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 IQCCQ4KMZ1 466 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 TMPRSS11FQ6ZWK6 438 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 DEPDC4Q8N2C3 294 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 TMEM54Q969K7 222 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 BOD1Q96IK1 185 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 FAM46AQ96IP4 442 aaKnown RBP10.56□□□□□ -0.72
HMGB2-201ENST00000296503 GON7Q9BXV9 100 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CCDC90BQ9GZT6 254 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 OBP2BQ9NPH6 170 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 KRCC1Q9NPI7 259 aaPredicted RBP10.56□□□□□ -0.72
HMGB2-201ENST00000296503 MGAT4BQ9UQ53 548 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 TMEM5Q9Y2B1 443 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 HIF3AQ9Y2N7 669 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CSMD1Q96PZ7 3565 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 CADP27708 2225 aa10.56□□□□□ -0.72
HMGB2-201ENST00000296503 HEATR1Q9H583 2144 aaKnown RBP10.56□□□□□ -0.72
HMGB2-201ENST00000296503 A0A075B6Q4 140 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 GNGT2O14610 69 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 HS3ST1O14792 307 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 IGHG1P01857 330 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 QDPRP09417 244 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 TSPAN19P0C672 248 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 CD53P19397 219 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 CD40P25942 277 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 RPL4P36578 427 aaKnown RBP10.55□□□□□ -0.72
HMGB2-201ENST00000296503 TBCEQ15813 527 aaPredicted RBP10.55□□□□□ -0.72
HMGB2-201ENST00000296503 TMEM236Q5W0B7 351 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 KDM4DQ6B0I6 523 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 SLC22A25Q6T423 547 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 ZNF813Q6ZN06 617 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 C20orf204Q6ZNR8 217 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 HDDC2Q7Z4H3 204 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 SNX29P2Q8IUI4 249 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 IQCF2Q8IXL9 164 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 PARP16Q8N5Y8 322 aa10.55□□□□□ -0.72
HMGB2-201ENST00000296503 SYT14Q8NB59 555 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms