RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TRIB3Q96RU7 358 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 GPR87Q9BY21 358 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 KCNJ16Q9NPI9 418 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 FOXJ2Q9P0K8 574 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 STEAP1Q9UHE8 339 aa8.36□□□□□ -1.07
PDGFC-201ENST00000274071 ABT1Q9ULW3 272 aaKnown RBP8.36□□□□□ -1.07
PDGFC-201ENST00000274071 C20orf202A1L168 122 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SERTM1A2A2V5 107 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 H0YIZ8 118 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 MASP2O00187 686 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 KDELR3O43731 214 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 GPR37L1O60883 481 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 ETHE1O95571 254 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 OPN1LWP04000 364 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PGA4P0DJD7 388 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PGA5P0DJD9 388 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 LIPCP11150 499 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 BMI1P35226 326 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TM4SF4P48230 202 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TFPI2P48307 235 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 RAP1BP61224 184 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 NFATC2Q13469 925 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 EIF4EBP2Q13542 120 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 C1orf194Q5T5A4 169 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 WSCD1Q658N2 575 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 GRHL2Q6ISB3 625 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 FAM185AQ8N0U4 392 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 UMODL1-AS1Q8N2C9 162 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 FAM160A2Q8N612 972 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TOP6BLQ8N6T0 577 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 ACOT4Q8N9L9 421 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 OR2L3Q8NG85 312 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SFXN5Q8TD22 340 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TMEM159Q96B96 161 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 OTUB2Q96DC9 234 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SLC41A3Q96GZ6 507 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF514Q96K75 400 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 STACQ99469 402 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 BOCQ9BWV1 1114 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PARP12Q9H0J9 701 aaKnown RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SLC25A18Q9H1K4 315 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 ARL15Q9NXU5 204 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 UPB1Q9UBR1 384 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 ST6GALNAC2Q9UJ37 374 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SCN10AQ9Y5Y9 1956 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TRBV11-1A0A0K0K1C0 115 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 CDHR4A6H8M9 788 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TVP23AA6NH52 213 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 H7BY64 318 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PIN1P1O15428 100 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PLRG1O43660 514 aaKnown RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SCGNO76038 276 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SLC25A14O95258 325 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PPBPP02775 128 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 OR13C7P0DN81 318 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 PNLIPP16233 465 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 DGKAP23743 735 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SOAT1P35610 550 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 SELENOTP62341 195 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TANGO2Q6ICL3 276 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 STEAP1BQ6NZ63 245 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 MAML2Q8IZL2 1156 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 OR1L6Q8NGR2 347 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF587Q96SQ5 575 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TAF9BQ9HBM6 251 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 MSL2Q9HCI7 577 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 NOX4Q9NPH5 578 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDGFC-201ENST00000274071 CUTCQ9NTM9 273 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 TCFL5Q9UL49 500 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 HS3ST4Q9Y661 456 aa8.35□□□□□ -1.07
PDGFC-201ENST00000274071 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 TSPAN15O95858 294 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 DCNP07585 359 aaKnown RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 MRPL3P09001 348 aaKnown RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 ALPPL2P10696 532 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 AKT2P31751 481 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 MC1RQ01726 317 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 NIPAL3Q6P499 406 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 MEPCEQ7L2J0 689 aaKnown RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 LYG1Q8N1E2 194 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 CLEC1AQ8NC01 280 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 THAP3Q8WTV1 239 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 IGSF21Q96ID5 467 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 HCAR1Q9BXC0 346 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 TPSD1Q9BZJ3 242 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 CSTL1Q9H114 145 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 SLC35B3Q9H1N7 401 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 MRPS33Q9Y291 106 aaKnown RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 ARL5CA6NH57 179 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 SCAF4O95104 1147 aaKnown RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 IGSF6O95976 241 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 IGLV3-25P01717 112 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 ERCC1P07992 297 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-201ENST00000274071 AOAHP28039 575 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 PCSK1P29120 753 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 TAS2R38P59533 333 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 ZNF85Q03923 595 aa8.34□□□□□ -1.07
PDGFC-201ENST00000274071 CHIT1Q13231 466 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms