RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CD226Q15762 336 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 MPPED2Q15777 294 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 SWI5Q1ZZU3 235 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 KLHL26Q53HC5 615 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 CCDC157Q569K6 752 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 ZNF550Q7Z398 422 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 PRR22Q8IZ63 422 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 SPAG16Q8N0X2 631 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 DCUN1D4Q92564 292 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 CTSFQ9UBX1 484 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 KLK13Q9UKR3 277 aa11.66□□□□□ -0.54
COL8A1-202ENST00000273342 A0A087WV62 115 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ZNF208O43345 1280 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 SMIM10L1P0DMW3 83 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ALOX5APP20292 161 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ZNF10P21506 573 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ACTBP60709 375 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ACTG1P63261 375 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 MFGE8Q08431 387 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ACOT7LQ6ZUV0 252 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 CDC20BQ86Y33 519 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 CCDC36Q8IYA8 594 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 KDM8Q8N371 416 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 SMIM10Q96HG1 83 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 INTS14Q96SY0 518 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 MRI1Q9BV20 369 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 KIR3DX1Q9H7L2 352 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 FBXL21Q9UKT6 434 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 SLC17A4Q9Y2C5 497 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 TGFBR3LH3BV60 316 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 OR6A2O95222 327 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 MPZL1O95297 269 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 WISP1O95388 367 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 CD1AP06126 327 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ZNF806P0C7X5 589 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 MAOAP21397 527 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 PRPS1P60891 318 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 SNRPEP62304 92 aaKnown RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 CA13Q8N1Q1 262 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 ZNF563Q8TA94 476 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 NUBPLQ8TB37 319 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 SLC25A44Q96H78 314 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 C4orf45Q96LM5 186 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 OR2M4Q96R27 311 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 PARP12Q9H0J9 701 aaKnown RBP11.65□□□□□ -0.54
COL8A1-202ENST00000273342 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 CSAG2Q9Y5P2 127 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.54
COL8A1-202ENST00000273342 A0A1W2PPC1 479 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 SERINC4A6NH21 518 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 TMEM212A6NML5 194 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 SULT2B1O00204 365 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 OR2F2O95006 317 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 NUDT14O95848 222 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 ERCC1P07992 297 aaPredicted RBP11.65□□□□□ -0.55
COL8A1-202ENST00000273342 HTR2CP28335 458 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 MEOX2P50222 304 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 OR2F1Q13607 317 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 DNM1P46Q6ZS02 220 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF584Q8IVC4 421 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 NT5CQ8TCD5 201 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 TM4SF19Q96DZ7 209 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 COA4Q9NYJ1 87 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 DHCR7Q9UBM7 475 aaKnown RBP11.65□□□□□ -0.55
COL8A1-202ENST00000273342 KLF15Q9UIH9 416 aa11.65□□□□□ -0.55
COL8A1-202ENST00000273342 TRBV5-7A0A0A0MS05 114 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 CDC14CA4D256 554 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 SLC17A2O00624 439 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 SDHAP31040 664 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 DMWDQ09019 674 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 AIMP2Q13155 320 aaKnown RBP11.64□□□□□ -0.55
COL8A1-202ENST00000273342 TGIF1Q15583 401 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 INPP5JQ15735 1006 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF74Q16587 644 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 ZNF528Q3MIS6 628 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 NKAPLQ5M9Q1 402 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 FAM122BQ7Z309 247 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 BADQ92934 168 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 MCHR2Q969V1 340 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 FREM3P0C091 2139 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 TRAV20A0A0B4J274 112 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
COL8A1-202ENST00000273342 SNAPC5O75971 98 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 AK1P00568 194 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 PNLIPRP2P54317 469 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 PRMT2P55345 433 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 PMPCAQ10713 525 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 RNASE10Q5GAN6 216 aaKnown RBP11.64□□□□□ -0.55
COL8A1-202ENST00000273342 TMEM225Q6GV28 225 aa11.64□□□□□ -0.55
COL8A1-202ENST00000273342 PAPD4Q6PIY7 484 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms