RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PPP2CBP62714 309 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 PPP2CAP67775 309 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 TMEM240Q5SV17 173 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 AGBL4Q5VU57 503 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 RAET1LQ5VY80 246 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 BAP18Q8IXM2 172 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 BPIFCQ8NFQ6 507 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 LURAP1Q96LR2 239 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 OCSTAMPQ9BR26 566 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 BANF2Q9H503 90 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 CD207Q9UJ71 328 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 PCDHB10Q9UN67 800 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF175Q9Y473 711 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 SLC22A7Q9Y694 548 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF217O75362 1048 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 BLVRBP30043 206 aaPredicted RBP10.54□□□□□ -0.72
VPS33A-201ENST00000267199 C21orf58P58505 322 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 MRPS21P82921 87 aaKnown RBP10.54□□□□□ -0.72
VPS33A-201ENST00000267199 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 RRNAD1Q96FB5 475 aaKnown RBP10.54□□□□□ -0.72
VPS33A-201ENST00000267199 CUTCQ9NTM9 273 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 WIF1Q9Y5W5 379 aa10.54□□□□□ -0.72
VPS33A-201ENST00000267199 IDSB3KWA1 339 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 LCATP04180 440 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 PSMB6P28072 239 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 PCBP4P57723 403 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 DMRTC1Q5HYR2 192 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 EXOSC6Q5RKV6 272 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TMEM201Q5SNT2 666 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SUMF1Q8NBK3 374 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 OR1J2Q8NGS2 313 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 ASB17Q8WXJ9 295 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 BORCS8Q96FH0 119 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SHDQ96IW2 340 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TEX101Q9BY14 249 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 C20orf141Q9NUB4 165 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 LRIT1Q9P2V4 623 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 RARRES3Q9UL19 164 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TUBAL3A6NHL2 446 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 A6NIZ1 184 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 DCTN6O00399 190 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SIGLEC5O15389 551 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 HCRTR1O43613 425 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 HOXB3P14651 431 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF136P52737 540 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 RAP1BP61224 184 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 RAP1AP62834 184 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SIGLEC14Q08ET2 396 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 PRR18Q8N4B5 295 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 OR4D11Q8NGI4 311 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 DDIT4LQ96D03 193 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TCTN2Q96GX1 697 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 LMAN1LQ9HAT1 526 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SERGEFQ9UGK8 458 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 NDRG3Q9UGV2 375 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 MCRIP1C9JLW8 97 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF354AO60765 605 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 NME1P15531 152 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 BAMBIQ13145 260 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 Q6ZRG5 221 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 FAM57BQ71RH2 274 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 ANGPTL5Q86XS5 388 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SYS1Q8N2H4 156 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 MUC20Q8N307 709 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 OR5B2Q96R09 309 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SEMA6CQ9H3T2 930 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SIRT3Q9NTG7 399 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 MRPS28Q9Y2Q9 187 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TPRP12270 2363 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 A0A087WZY1 265 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 NPIPB8E9PQR5 432 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SDCBPO00560 298 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SEC14L5O43304 696 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 UTS2O95399 124 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 CD53P19397 219 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 CD38P28907 300 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF84P51523 738 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 LPCAT3Q6P1A2 487 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 CPEB2Q7Z5Q1 589 aaKnown RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TMEM217Q8N7C4 229 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 OR4S1Q8NGB4 309 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 OR1S1Q8NH92 325 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 TINAGL1Q9GZM7 467 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-201ENST00000267199 PLEK2Q9NYT0 353 aa10.53□□□□□ -0.72
VPS33A-201ENST00000267199 A0A087WV62 115 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 GPR31O00270 319 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 ST6GAL1P15907 406 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF93P35789 620 aaPredicted RBP10.52□□□□□ -0.72
VPS33A-201ENST00000267199 DAP3P51398 398 aaKnown RBP10.52□□□□□ -0.72
VPS33A-201ENST00000267199 RAB4BP61018 213 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 TCTN1Q2MV58 587 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 FJX1Q86VR8 437 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 MRPL41Q8IXM3 137 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms