RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FBXL2Q9UKC9 423 aa12.73□□□□□ -0.37
CDH3-201ENST00000264012 SRP9P49458 86 aaKnown RBP12.72□□□□□ -0.37
CDH3-201ENST00000264012 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 VN1R4Q7Z5H5 301 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 ZNF610Q8N9Z0 462 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 CNTNAP3BQ96NU0 1288 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 DOCK5Q9H7D0 1870 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 CCDC163A0A0D9SF12 145 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 AGAP14A8MT82 685 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 EIF2S3P41091 472 aaKnown RBP12.72□□□□□ -0.37
CDH3-201ENST00000264012 ARF1P84077 181 aaKnown RBP12.72□□□□□ -0.37
CDH3-201ENST00000264012 USP51Q70EK9 711 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 COMTD1Q86VU5 262 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 MED30Q96HR3 178 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 OR5B12Q96R08 314 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 MBD1Q9UIS9 605 aaPredicted RBP12.72□□□□□ -0.37
CDH3-201ENST00000264012 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 MPPED1O15442 326 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 LAP3P28838 519 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 BHLHE23Q8NDY6 225 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 OR1N1Q8NGS0 311 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 SLC25A21Q9BQT8 299 aaPredicted RBP12.72□□□□□ -0.37
CDH3-201ENST00000264012 SLC25A31Q9H0C2 315 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 C20orf85Q9H1P6 137 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 BANF2Q9H503 90 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 D6RAR5 112 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 C5orf67F2Z3F1 127 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 GABARAPH6UMI1 98 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 NXPH2O95156 264 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 GPR32P1Q8NGA4 272 aa12.72□□□□□ -0.37
CDH3-201ENST00000264012 MBTPS2O43462 519 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 CXCL13O43927 109 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 APEHP13798 732 aaKnown RBP12.71□□□□□ -0.37
CDH3-201ENST00000264012 EGR3Q06889 387 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 FAPQ12884 760 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 AADACL3Q5VUY0 350 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 OXGR1Q96P68 337 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 KCNG2Q9UJ96 466 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 PCDHB10Q9UN67 800 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 KLF13Q9Y2Y9 288 aaPredicted RBP12.71□□□□□ -0.37
CDH3-201ENST00000264012 XIRP1Q702N8 1843 aaKnown RBP12.71□□□□□ -0.37
CDH3-201ENST00000264012 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 STMND1H3BQB6 276 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 K7EQS6 105 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 PMP2P02689 132 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 GUSBP08236 651 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
CDH3-201ENST00000264012 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.37
CDH3-201ENST00000264012 FOXF1Q12946 379 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 AQP6Q13520 282 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 EIF4EBP2Q13542 120 aaPredicted RBP12.71□□□□□ -0.37
CDH3-201ENST00000264012 MSMO1Q15800 293 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 LTC4SQ16873 150 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 OTPQ5XKR4 325 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 OR5T1Q8NG75 326 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 OR4C3Q8NH37 302 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 C22orf15Q8WYQ4 148 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 SLC35B4Q969S0 331 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 C1orf123Q9NWV4 160 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 IL20Q9NYY1 176 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 MYOTQ9UBF9 498 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 GNG12Q9UBI6 72 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 SEC16AO15027 2179 aa12.71□□□□□ -0.37
CDH3-201ENST00000264012 A0A087WUJ7 227 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 IGHV1OR15-9A0A0B4J2B8 117 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 ZNF728P0DKX0 622 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 EDN3P14138 238 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.38
CDH3-201ENST00000264012 OR1M1Q8NGA1 313 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 OR52I2Q8NH67 350 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 SGK3Q96BR1 496 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.38
CDH3-201ENST00000264012 ING1Q9UK53 422 aaPredicted RBP12.71□□□□□ -0.38
CDH3-201ENST00000264012 LRRC37AA6NMS7 1700 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 PRICKLE3O43900 615 aaPredicted RBP12.71□□□□□ -0.38
CDH3-201ENST00000264012 ACSM1Q08AH1 577 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 BCL2A1Q16548 175 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 ESCO2Q56NI9 601 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 ZG16BQ96DA0 208 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 RAB39BQ96DA2 213 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 SPACA9Q96E40 222 aaPredicted RBP12.71□□□□□ -0.38
CDH3-201ENST00000264012 DEFB127Q9H1M4 99 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.38
CDH3-201ENST00000264012 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 A0A0D9SG52 128 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 SHISA7A6NL88 538 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 CEBPZOSA8MTT3 80 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 TNFSF12O43508 249 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 C12orf73Q69YU5 71 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 RFPL4BQ6ZWI9 263 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 OR4D6Q8NGJ1 314 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 SLC7A6Q92536 515 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 SIGLEC11Q96RL6 698 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 SEC22CQ9BRL7 303 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms