RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 VPS25Q9BRG1 176 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 P2RY12Q9H244 342 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 MBNL1Q9NR56 388 aaKnown RBP11.04□□□□□ -0.64
SMG6-201ENST00000263073 ADAM29Q9UKF5 820 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 SLC22A13Q9Y226 551 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 NOSIPQ9Y314 301 aaKnown RBP11.04□□□□□ -0.64
SMG6-201ENST00000263073 ZAR1LA6NP61 321 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 MAN2B1O00754 1011 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 ZFAND5O76080 213 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 HLA-HP01893 362 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 HRH1P35367 487 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 MAP2K6P52564 334 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 AGERQ15109 404 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 ABHD17CQ6PCB6 329 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 SYT13Q7L8C5 426 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 SPHK1Q9NYA1 384 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 FBXL4Q9UKA2 621 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.04□□□□□ -0.64
SMG6-201ENST00000263073 NSG1A0A0A6YYJ2 146 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 LOC107986453A0A1B0GWG9 222 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 UNCXA6NJT0 531 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 AQP7P3A6NL99 342 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 ETHE1O95571 254 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 CD14P08571 375 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 SNCAP37840 140 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 AKR1E2Q96JD6 320 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 LOXHD1Q8IVV2 1947 aa11.04□□□□□ -0.64
SMG6-201ENST00000263073 NXPH2O95156 264 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 OR4F5Q8NH21 305 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 MYEOVQ96EZ4 313 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 OR4F4Q96R69 305 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 CTSFQ9UBX1 484 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 KCNG2Q9UJ96 466 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 SCML1Q9UN30 329 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 KIR2DS5A0A0G2JLQ3 304 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 A0A0G2JNG1 304 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 TMEM129A0AVI4 362 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 OR6C68A6NDL8 312 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 KIR2DS3K7RE56 304 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 SCRG1O75711 98 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 RPS16P62249 146 aaKnown RBP11.03□□□□□ -0.64
SMG6-201ENST00000263073 TEKQ02763 1124 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 KIR2DS5Q14953 304 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 CTF1Q16619 201 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 PPP1R35Q8TAP8 253 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 MARCH1Q8TCQ1 289 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 WBP2Q969T9 261 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 GABARAPL3Q9BY60 117 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 SLC6A13Q9NSD5 602 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 NHSL1Q5SYE7 1610 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
SMG6-201ENST00000263073 XRCC2O43543 280 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 OR8U8P0C7N1 319 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 GABRA4P48169 554 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 EVX1P49640 407 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 LRRTM1Q86UE6 522 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 NAXDQ8IW45 347 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 LRFN5Q96NI6 719 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 HEYLQ9NQ87 328 aaPredicted RBP11.03□□□□□ -0.64
SMG6-201ENST00000263073 ARL2-SNX15V9GYD0 113 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 A0A1W2PR48 441 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 H0Y8X5 98 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 ZNF217O75362 1048 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 SLCO2B1O94956 709 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 OR4E1P0C645 316 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 ACKR3P25106 362 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 F2RL1P55085 397 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 SPANXN5Q5MJ07 72 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 TEX261Q6UWH6 196 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 ZNF595Q8IYB9 648 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 GAREM1Q9H706 876 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 U3KQ87 197 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
SMG6-201ENST00000263073 TMPRSS11DO60235 418 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 ABHD16AO95870 558 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 LANCL3Q6ZV70 420 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 ADIPOR2Q86V24 386 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 UCN3Q969E3 161 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 LCORQ96JN0 433 aaPredicted RBP11.03□□□□□ -0.64
SMG6-201ENST00000263073 KPTNQ9Y664 436 aa11.03□□□□□ -0.64
SMG6-201ENST00000263073 HBQ1P09105 142 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 GJA4P35212 333 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 RFX2P48378 723 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 P2RX1P51575 399 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 CATR1Q13166 79 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 NKG7Q16617 165 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 WDR5BQ86VZ2 330 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 MFSD4AQ8N468 514 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 EID2Q8N6I1 236 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 SLC25A21Q9BQT8 299 aaPredicted RBP11.02□□□□□ -0.64
SMG6-201ENST00000263073 SLC25A32Q9H2D1 315 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 DUSP13Q9UII6 198 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 ZNF346Q9UL40 294 aaKnown RBP11.02□□□□□ -0.64
SMG6-201ENST00000263073 PADI1Q9ULC6 663 aa11.02□□□□□ -0.64
SMG6-201ENST00000263073 OR2W5A6NFC9 320 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 PPP5D1E7EU14 171 aa11.02□□□□□ -0.65
SMG6-201ENST00000263073 NKX2-1P43699 371 aaPredicted RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 CSNK1EP49674 416 aaKnown RBP11.02□□□□□ -0.65
SMG6-201ENST00000263073 IHHQ14623 411 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms