RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 PAPLNO95428 1278 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 ITGA5P08648 1049 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 FGF7P21781 194 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 HTR1FP30939 366 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 NKX6-1P78426 367 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-201ENST00000263071 OR2F1Q13607 317 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 OR1Q1Q15612 314 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 ZNF674Q2M3X9 581 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 JMJD6Q6NYC1 403 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-201ENST00000263071 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
SCARF1-201ENST00000263071 OR52I2Q8NH67 350 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 MESP1Q9BRJ9 268 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 SEMA6CQ9H3T2 930 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
SCARF1-201ENST00000263071 GLRX2Q9NS18 164 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 OR14J1Q9UGF5 321 aa12.89□□□□□ -0.35
SCARF1-201ENST00000263071 A0A1W2PPV9 198 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 DUXAA6NLW8 204 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
SCARF1-201ENST00000263071 RAP1AP62834 184 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 RNF151Q2KHN1 245 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ENPP7Q6UWV6 458 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 SPTBN5Q9NRC6 3674 aaKnown RBP12.88□□□□□ -0.35
SCARF1-201ENST00000263071 TCF20Q9UGU0 1960 aaKnown RBP12.88□□□□□ -0.35
SCARF1-201ENST00000263071 GXYLT2A0PJZ3 443 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 IFITM10A6NMD0 228 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 C1QTNF3-AMACRE9PGA6 284 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 TGOLN2O43493 480 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 GAS1P54826 345 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 SHC2P98077 582 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 SLC10A1Q14973 349 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 OR7A5Q15622 319 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 HIST2H3AQ71DI3 136 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 CRIPAKQ8N1N5 446 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 EPHX3Q9H6B9 360 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 FGF20Q9NP95 211 aaPredicted RBP12.88□□□□□ -0.35
SCARF1-201ENST00000263071 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 A0A087WZY1 265 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ARRDC5A6NEK1 342 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ZGLP1P0C6A0 271 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 TYRP1P17643 537 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 REEP5Q00765 189 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 C14orf28Q4W4Y0 310 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ZAR1Q86SH2 424 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ZNF385AQ96PM9 386 aaKnown RBP12.88□□□□□ -0.35
SCARF1-201ENST00000263071 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ACTRT3Q9BYD9 372 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 MED31Q9Y3C7 131 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 MED12Q93074 2177 aa12.88□□□□□ -0.35
SCARF1-201ENST00000263071 SNRNP200O75643 2136 aaKnown RBP12.87□□□□□ -0.35
SCARF1-201ENST00000263071 LAMA1P25391 3075 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 OR5H15A6NDH6 313 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 TVP23AA6NH52 213 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 OR5H1A6NKK0 313 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 MKRN2OSH3BPM6 223 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 SLC26A5P58743 744 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 NOGQ13253 232 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 ELFN2Q5R3F8 820 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 SLC39A5Q6ZMH5 540 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 OR4N2Q8NGD1 307 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 DUSP19Q8WTR2 217 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 NKD1Q969G9 470 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 MENTQ9BUN1 341 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 SRMSQ9H3Y6 488 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 MED17Q9NVC6 651 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 CALML5Q9NZT1 146 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 CHTOPQ9Y3Y2 248 aaKnown RBP12.87□□□□□ -0.35
SCARF1-201ENST00000263071 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 A0A0A6YYD5 115 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 HLA-DQA2P01906 255 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 HNF4GQ14541 408 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 METRNLQ641Q3 311 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 NIPAL3Q6P499 406 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 ZNF813Q6ZN06 617 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-201ENST00000263071 IP6K3Q96PC2 410 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 ZMAT3Q9HA38 289 aaKnown RBP12.87□□□□□ -0.35
SCARF1-201ENST00000263071 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 EDDM13A0A1B0GTR0 161 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 EML2O95834 649 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 PMELP40967 661 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 DHPSP49366 369 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-201ENST00000263071 ZNF77Q15935 545 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 RPE65Q16518 533 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 KHDC3LQ587J8 217 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 MBOAT2Q6ZWT7 520 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 NDUFAF7Q7L592 441 aa12.87□□□□□ -0.35
SCARF1-201ENST00000263071 TMED4Q7Z7H5 227 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms