RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
SGCA-201ENST00000262018 ARL5BQ96KC2 179 aa11.71□□□□□ -0.53
SGCA-201ENST00000262018 OPALINQ96PE5 141 aa11.71□□□□□ -0.53
SGCA-201ENST00000262018 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.53
SGCA-201ENST00000262018 OR51V1Q9H2C8 321 aa11.71□□□□□ -0.53
SGCA-201ENST00000262018 INIPQ9NRY2 104 aa11.71□□□□□ -0.53
SGCA-201ENST00000262018 ZNF346Q9UL40 294 aaKnown RBP11.71□□□□□ -0.53
SGCA-201ENST00000262018 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
SGCA-201ENST00000262018 A0A1W2PNV4 684 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 OR6C68A6NDL8 312 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 GPRIN2O60269 458 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 TNFSF13O75888 250 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 PLAUP00749 431 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 CLUP10909 449 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 ZNF17P17021 662 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 IL11P20809 199 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 CCKARP32238 428 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 THBS2P35442 1172 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 ATP6V1E1P36543 226 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 CDKN2AP42771 156 aaKnown RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 RGS6P49758 472 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 CLK1P49759 484 aaKnown RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 WNT4P56705 351 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 RPS7P62081 194 aaKnown RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 LGALS3BPQ08380 585 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 MLLT11Q13015 90 aaPredicted RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 SELENBP1Q13228 472 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 AQP6Q13520 282 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 KRR1Q13601 381 aaKnown RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 LCN1P1Q5VSP4 162 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 RAET1LQ5VY80 246 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 JAZF1Q86VZ6 243 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 GTPBP8Q8N3Z3 284 aaPredicted RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 ZNF611Q8N823 705 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 ZNF485Q8NCK3 441 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 OR9Q1Q8NGQ5 310 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 OR52N1Q8NH53 320 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 ZNF417Q8TAU3 575 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 SFXN2Q96NB2 322 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 ZNF587Q96SQ5 575 aaPredicted RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 NMNAT3Q96T66 252 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
SGCA-201ENST00000262018 ADGRL4Q9HBW9 690 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 ERVK13-1Q9NX77 482 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 GRHPRQ9UBQ7 328 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 LPAR3Q9UBY5 353 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 MED12Q93074 2177 aa11.7□□□□□ -0.54
SGCA-201ENST00000262018 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 A0A1W2PPW3 197 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 LIPT2A6NK58 231 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 LINC01387J3KSC0 135 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 CCRL2O00421 344 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 HS3ST1O14792 307 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 OR6A2O95222 327 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ACTL6AO96019 429 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 SBK2P0C263 348 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 HSMCR30P0CW71 290 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 TFPIP10646 304 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 SPI1P17947 270 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 CAPZA2P47755 286 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 GFRA1P56159 465 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 OR7A5Q15622 319 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 SSX1Q16384 188 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 TSTQ16762 297 aaKnown RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 MESTQ5EB52 335 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 LEG1Q6P5S2 330 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 B3GLCTQ6Y288 498 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 H1FNTQ75WM6 255 aaPredicted RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ADPRHL1Q8NDY3 354 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 KBTBD8Q8NFY9 601 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 DNAJA3Q96EY1 480 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 SHARPINQ9H0F6 387 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 SLCO5A1Q9H2Y9 848 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 TXNIPQ9H3M7 391 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 FANCFQ9NPI8 374 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ASB6Q9NWX5 421 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 MED12LQ86YW9 2145 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 OR2M5A3KFT3 312 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 NPIPB13A6NJU9 1138 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 C12orf71A8MTZ7 269 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 NPIPB4C9JG80 1138 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 C11orf98E9PRG8 122 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 MS4A18H0YCH9 400 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 C16orf97H3BN30 126 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 RNF13O43567 381 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 GLCEO94923 617 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 GYPBP06028 91 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 CPN1P15169 458 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 NR4A1P22736 598 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 TCEA1P23193 301 aaKnown RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 GADD45AP24522 165 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 GTF2E2P29084 291 aaKnown RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 DIO1P49895 249 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms