RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GTF2E2P29084 291 aaKnown RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 PCK1P35558 622 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 SLC1A2P43004 574 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 MAGEA6P43360 314 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TGM4P49221 684 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 NOVA1P51513 510 aaKnown RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ATP1B3P54709 279 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 UCNP55089 124 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 LIM2P55344 173 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 UBE2G2P60604 165 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 VSNL1P62760 191 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 C1orf61Q13536 156 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ATXN7L3Q14CW9 347 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 KIAA0040Q15053 153 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 LRRC36Q1X8D7 754 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 CHRFAM7AQ494W8 412 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 RNF212Q495C1 297 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 C5orf46Q6UWT4 87 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 PID1Q7Z2X4 250 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ACOT1Q86TX2 421 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 APOBEC3FQ8IUX4 373 aaKnown RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 APRG1Q8IVJ8 170 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 CMTM8Q8IZV2 173 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 C11orf42Q8N5U0 333 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ZSCAN4Q8NAM6 433 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 NECAP1Q8NC96 275 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 STXBP6Q8NFX7 210 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 OR10A7Q8NGE5 316 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 OR5M1Q8NGP8 315 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 RNASE11Q8TAA1 199 aaKnown RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 GTF2H4Q92759 462 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 CPNE4Q96A23 557 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 NUS1Q96E22 293 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 SLC38A2Q96QD8 506 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM246Q9BRR3 403 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 MED10Q9BTT4 135 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 DUSP16Q9BY84 665 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ZYG11BQ9C0D3 744 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ALX4Q9H161 411 aaPredicted RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 METTL9Q9H1A3 318 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ZC4H2Q9NQZ6 224 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 POLE4Q9NR33 117 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ABCB10Q9NRK6 738 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 THUMPD1Q9NXG2 353 aaKnown RBP3.21□□□□□ -1.9
CCDC54-201ENST00000261058 SPRR3Q9UBC9 169 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 ERVW-1Q9UQF0 538 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 POFUT2Q9Y2G5 429 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 TIMM10BQ9Y5J6 103 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 PLEKHG1Q9ULL1 1385 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 FHOD3Q2V2M9 1422 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 LRRK1Q38SD2 2015 aa3.21□□□□□ -1.9
CCDC54-201ENST00000261058 A0A1B0GTI1 187 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 A0A1W2PRD5 423 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CHST1O43916 411 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CST8O60676 142 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 OR2J3O76001 311 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 B3GAT3O94766 335 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 IGF1P05019 195 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 ALDOBP05062 364 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 UBCP0CG48 685 aaKnown RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 MAGP20916 626 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CNR1P21554 472 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 KITLGP21583 273 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 BGNP21810 368 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 F8A1P23610 371 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 DTYMKP23919 212 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CRABP1P29762 137 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 HNRNPH3P31942 346 aaKnown RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 P2RY1P47900 373 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 RFX3P48380 749 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 MRPL19P49406 292 aaKnown RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 AP2S1P53680 142 aaPredicted RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 NUP107P57740 925 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 TAS2R60P59551 318 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CXCR4P61073 352 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 MAGOHP61326 146 aaKnown RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 VLDLRP98155 873 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 RELAQ04206 551 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CHI3L2Q15782 390 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 TRIM16LQ309B1 348 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 NDUFAF6Q330K2 333 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 VPS26BQ4G0F5 336 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 PTPN20Q4JDL3 420 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 KLHL12Q53G59 568 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 ACTBL2Q562R1 376 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 COQ5Q5HYK3 327 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 OR52W1Q6IF63 320 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 ANKRD26P1Q6NSI1 321 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 HSDL2Q6YN16 418 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 DPPA2Q7Z7J5 298 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM17Q86X19 198 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CYP4Z2PQ8N1L4 340 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 OR10H4Q8NGA5 316 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 OR2D3Q8NGH3 330 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 OR5D18Q8NGL1 313 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 NUBPLQ8TB37 319 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 GPR151Q8TDV0 419 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 SMARCD2Q92925 531 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 BORCS5Q969J3 196 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 FAM131CQ96AQ9 280 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms