RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 MMP15P51511 669 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 HNRNPA0Q13151 305 aaKnown RBP16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 ENDOGQ14249 297 aaKnown RBP16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 MOGQ16653 247 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 OTPQ5XKR4 325 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 FAHD2BQ6P2I3 314 aaPredicted RBP16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 THSD4Q6ZMP0 1018 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 MBOAT2Q6ZWT7 520 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 ZNF771Q7L3S4 317 aaPredicted RBP16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 ALDH16A1Q8IZ83 802 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 OR51F2Q8NH61 342 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 FAHD2AQ96GK7 314 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 OCEL1Q9H607 264 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 SAP30LQ9HAJ7 183 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 METRNQ9UJH8 293 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 TIMM10BQ9Y5J6 103 aa16.17■□□□□ 0.18
TM6SF1-201ENST00000258909 A6NIZ1 184 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 ZSCAN5BA6NJL1 495 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 IGHV1-46P01743 117 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 SLC9A3P48764 834 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 RAP1BP61224 184 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 PPP1CBP62140 327 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 RAP1AP62834 184 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 FAM205BPQ63HN1 556 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 FOXL2NBQ6ZUU3 175 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 TSEN54Q7Z6J9 526 aaKnown RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 RNF113BQ8IZP6 322 aaKnown RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 FNDC8Q8TC99 324 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 FAM162AQ96A26 154 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 Q96M85 177 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 HOPXQ9BPY8 73 aaPredicted RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 ZNF665Q9H7R5 613 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 GRIP1Q9Y3R0 1128 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 WIPI2Q9Y4P8 454 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 ARHGAP32A7KAX9 2087 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 PLSCR5A0PG75 271 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 RGS9O75916 674 aaPredicted RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 MSR1P21757 451 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 RBMXP38159 391 aaKnown RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 NUDT2P50583 147 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 TEKQ02763 1124 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 HFEQ30201 348 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 SPRNQ5BIV9 151 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 C8orf82Q6P1X6 216 aaPredicted RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 CCL17Q92583 94 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 EFCAB1Q9HAE3 211 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 NMNAT1Q9HAN9 279 aaPredicted RBP16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 POLE4Q9NR33 117 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 GRHPRQ9UBQ7 328 aa16.16■□□□□ 0.18
TM6SF1-201ENST00000258909 CLDN25C9JDP6 229 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 CCDC22O60826 627 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 MDH1P40925 334 aaKnown RBP16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 PCBD1P61457 104 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 ANKDD1AQ495B1 522 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 ZBED5Q49AG3 693 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 MESTQ5EB52 335 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 MBNL2Q5VZF2 373 aaKnown RBP16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 SHQ1Q6PI26 577 aaKnown RBP16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 TMPRSS11FQ6ZWK6 438 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 RRM2BQ7LG56 351 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 FAM46AQ96IP4 442 aaKnown RBP16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 C4orf45Q96LM5 186 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 KCTD14Q9BQ13 255 aaPredicted RBP16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 MSL2Q9HCI7 577 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 TENM1Q9UKZ4 2725 aa16.15■□□□□ 0.18
TM6SF1-201ENST00000258909 C12orf71A8MTZ7 269 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 IMPA2O14732 288 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 PLPP2O43688 288 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 MPZL1O95297 269 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 CD14P08571 375 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 HSP90B2PQ58FF3 399 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 ACSM5Q6NUN0 579 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 UNQ6126/PRO20091Q6UXV3 157 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 SLC7A13Q8TCU3 470 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 RASD2Q96D21 266 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 ELMOD3Q96FG2 381 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 ZNF570Q96NI8 536 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 POFUT1Q9H488 388 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 RERGLQ9H628 205 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 EGFL7Q9UHF1 273 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 IL20RAQ9UHF4 553 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 ENPP4Q9Y6X5 453 aa16.14■□□□□ 0.17
TM6SF1-201ENST00000258909 TRAV20A0A0B4J274 112 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 HAX1O00165 279 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 XKRYO14609 159 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 DEAF1O75398 565 aaPredicted RBP16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 VENTXO95231 258 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 AVPP01185 164 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 FAM209AQ5JX71 171 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 C1orf229Q6ZS94 237 aaPredicted RBP16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 FAM122BQ7Z309 247 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 CYP4Z1Q86W10 505 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 RAB1CQ92928 201 aa16.13■□□□□ 0.17
TM6SF1-201ENST00000258909 LOC105371242A0A075B767 164 aa16.12■□□□□ 0.17
TM6SF1-201ENST00000258909 TEX13CA0A0J9YWL9 993 aa16.12■□□□□ 0.17
TM6SF1-201ENST00000258909 PRSS37A4D1T9 235 aa16.12■□□□□ 0.17
TM6SF1-201ENST00000258909 UBOX5O94941 541 aa16.12■□□□□ 0.17
TM6SF1-201ENST00000258909 DIRAS1O95057 198 aa16.12■□□□□ 0.17
TM6SF1-201ENST00000258909 ABHD16AO95870 558 aa16.12■□□□□ 0.17
TM6SF1-201ENST00000258909 PNPP00491 289 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms