RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LOC102725191A0A1B0GVB3 256 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 UPK3AO75631 287 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ABHD16AO95870 558 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 KRT8P05787 483 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 HPNP05981 417 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 CAPZA2P47755 286 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 BLVRAP53004 296 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 RAC3P60763 192 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 RSBN1Q5VWQ0 802 aaPredicted RBP16.8■□□□□ 0.28
TRIM47-201ENST00000254816 RPL22L1Q6P5R6 122 aaKnown RBP16.8■□□□□ 0.28
TRIM47-201ENST00000254816 LRRN1Q6UXK5 716 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ESPNLQ6ZVH7 1005 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 FAM220AQ7Z4H9 259 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 LINC00346Q8IVM7 164 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 OR10D3Q8NH80 312 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 HAS2Q92819 552 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 SLC22A4Q9H015 551 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 B3GAT2Q9NPZ5 323 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 DNAJC13O75165 2243 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 A8MV72 311 aaPredicted RBP16.79■□□□□ 0.28
TRIM47-201ENST00000254816 NPIPA2E9PIF3 369 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 NPIPA3F8WFD2 350 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 ITGB2P05107 769 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 GAAP10253 952 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 AGFG1P52594 562 aaKnown RBP16.79■□□□□ 0.28
TRIM47-201ENST00000254816 FOXC1Q12948 553 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 IL18Q14116 193 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 EIF2B1Q14232 305 aaKnown RBP16.79■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF766Q5HY98 468 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 OR9K2Q8NGE7 335 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 OR2V1Q8NHB1 315 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 ITFG2Q969R8 447 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF845Q96IR2 970 aaPredicted RBP16.79■□□□□ 0.28
TRIM47-201ENST00000254816 TMEM14AQ9Y6G1 99 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 A0A1W2PPL8 197 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 KLRC4-KLRK1H3BQV0 150 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 PLA2G10O15496 165 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 EFSO43281 561 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF823P16415 610 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 SRYQ05066 204 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 SLC17A1Q14916 467 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 THEM4Q5T1C6 240 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 IDNKQ5T6J7 187 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 Q8N402 240 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 CHAC2Q8WUX2 184 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 MCHR2Q969V1 340 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 MNTQ99583 582 aa16.79■□□□□ 0.28
TRIM47-201ENST00000254816 SMAD5Q99717 465 aaKnown RBP16.79■□□□□ 0.28
TRIM47-201ENST00000254816 A0A1W2PPK0 400 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 GFRA3O60609 400 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 GLSO94925 669 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-201ENST00000254816 TACSTD2P09758 323 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 SLC2A2P11168 524 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-201ENST00000254816 CDAP32320 146 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 EGR3Q06889 387 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 CORO6Q6QEF8 472 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 CEACAM19Q7Z692 300 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 ABHD6Q9BV23 337 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 PPP1R3EQ9H7J1 279 aa16.78■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF891A8MT65 544 aaPredicted RBP16.77■□□□□ 0.28
TRIM47-201ENST00000254816 VAMP5O95183 116 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 QDPRP09417 244 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 EVX1P49640 407 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 PPIAP62937 165 aaKnown RBP16.77■□□□□ 0.28
TRIM47-201ENST00000254816 CCDC58Q4VC31 144 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 ACSM3Q53FZ2 586 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 PHYHD1Q5SRE7 291 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 SLC18B1Q6NT16 456 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 PLXDC2Q6UX71 529 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 TRILQ7L0X0 811 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 GLB1L2Q8IW92 636 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 DTX3Q8N9I9 347 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 C11orf40Q8WZ69 217 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 KCNN2Q9H2S1 579 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 SEC61A2Q9H9S3 476 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 ELOVL3Q9HB03 270 aa16.77■□□□□ 0.28
TRIM47-201ENST00000254816 CENPBD1B2RD01 187 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 FAM25AB3EWG3 89 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 FAM25CB3EWG5 89 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 FAM25GB3EWG6 89 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 PHYHO14832 338 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 CD53P19397 219 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 OR10A3P58181 314 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 LRFN4Q6PJG9 635 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 SLC25A47Q6Q0C1 308 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 KCTD20Q7Z5Y7 419 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 GLCCI1Q86VQ1 547 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 ZIC4Q8N9L1 334 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 SCMH1Q96GD3 660 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 OR8B4Q96RC9 309 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 SOSTQ9BQB4 213 aa16.77■□□□□ 0.27
TRIM47-201ENST00000254816 MEIOCA2RUB1 952 aa16.76■□□□□ 0.27
TRIM47-201ENST00000254816 SC5DO75845 299 aa16.76■□□□□ 0.27
TRIM47-201ENST00000254816 MAGEB1P43366 347 aa16.76■□□□□ 0.27
TRIM47-201ENST00000254816 SELENOPP49908 381 aa16.76■□□□□ 0.27
TRIM47-201ENST00000254816 LHX2P50458 406 aa16.76■□□□□ 0.27
TRIM47-201ENST00000254816 TNFSF10P50591 281 aa16.76■□□□□ 0.27
TRIM47-201ENST00000254816 RPS11P62280 158 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRIM47-201ENST00000254816 POU4F3Q15319 338 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms