RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 MELKQ14680 651 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 KIF26BQ2KJY2 2108 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 YOD1Q5VVQ6 348 aaPredicted RBP15.3■□□□□ 0.04
FOXA1-201ENST00000250448 NPSR1Q6W5P4 371 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 ZNF321PQ8N8H1 164 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 OR8K3Q8NH51 312 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 FBXW5Q969U6 566 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 SEMA5BQ9P283 1151 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 GPR160Q9UJ42 338 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 FBXL2Q9UKC9 423 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 IKZF2Q9UKS7 526 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 MOKQ9UQ07 419 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 IGKV1D-42A0A075B6H8 117 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 OR4C45A6NMZ5 311 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 BLOC1S5-TXNDC5H3BN57 136 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 CTAG2O75638 210 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 ZNF432O94892 652 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 AKAIN1P0CW23 69 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 GTF2F2P13984 249 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 PSMD4P55036 377 aaKnown RBP15.3■□□□□ 0.04
FOXA1-201ENST00000250448 ARHGAP40Q5TG30 622 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 ANKRD16Q6P6B7 361 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 C11orf88Q6PI97 169 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 CDC20BQ86Y33 519 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 EIF4E3Q8N5X7 224 aaKnown RBP15.3■□□□□ 0.04
FOXA1-201ENST00000250448 OR51S1Q8NGJ8 323 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 OR10AC1Q8NH08 325 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 VSTM2LQ96N03 204 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 CTSFQ9UBX1 484 aa15.3■□□□□ 0.04
FOXA1-201ENST00000250448 D6RAR5 112 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 RPA2P15927 270 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 EFNB2P52799 333 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 FAM122BQ7Z309 247 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 ZNF676Q8N7Q3 588 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 SLC19A3Q9BZV2 496 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 COMMD4Q9H0A8 199 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 MPDZO75970 2070 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 SERINC4A6NH21 518 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 LINC01387J3KSC0 135 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 NUPL2O15504 423 aaKnown RBP15.29■□□□□ 0.04
FOXA1-201ENST00000250448 SPDEFO95238 335 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 CD14P08571 375 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 FBLP22087 321 aaKnown RBP15.29■□□□□ 0.04
FOXA1-201ENST00000250448 GRK6P43250 576 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 SORDQ00796 357 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 OR6K3Q8NGY3 331 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 OR2G2Q8NGZ5 317 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 TMEM106AQ96A25 262 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 MFFQ9GZY8 342 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 OCIAD1Q9NX40 245 aa15.29■□□□□ 0.04
FOXA1-201ENST00000250448 CDV3Q9UKY7 258 aaKnown RBP15.29■□□□□ 0.04
FOXA1-201ENST00000250448 EP300Q09472 2414 aaPredicted RBP15.28■□□□□ 0.04
FOXA1-201ENST00000250448 MEIS3P1A6NDR6 274 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 TVP23AA6NH52 213 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 H3BSH0 61 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 IGF2P01344 180 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 PNLIPP16233 465 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 MPGP29372 298 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 C10orf53Q8N6V4 93 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 OR51D1Q8NGF3 324 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 LAMP5Q9UJQ1 280 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 HIF3AQ9Y2N7 669 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 RALGAPA1Q6GYQ0 2036 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 HPP00738 406 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 RLN2P04090 185 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 CTXN1P60606 82 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 LRRC75AQ8NAA5 344 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 OR51A4Q8NGJ6 313 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 GPR148Q8TDV2 347 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 NAT6Q93015 286 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 MRPS24Q96EL2 167 aaKnown RBP15.28■□□□□ 0.04
FOXA1-201ENST00000250448 G6PC3Q9BUM1 346 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 EXO5Q9H790 373 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 SRA1Q9HD15 236 aaKnown RBP15.28■□□□□ 0.04
FOXA1-201ENST00000250448 Q9N2J8 555 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 SLC6A5Q9Y345 797 aa15.28■□□□□ 0.04
FOXA1-201ENST00000250448 TRAV18A0A075B6X5 111 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 LNP1A1A4G5 178 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 ELOA3DA6NLF2 546 aaPredicted RBP15.27■□□□□ 0.04
FOXA1-201ENST00000250448 TMEM212A6NML5 194 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 C17orf105B2RV13 164 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 DCTN6O00399 190 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 KDM4BO94953 1096 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 ZMYND11Q15326 602 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 ELOA3BQ3SY89 546 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 KMT5CQ86Y97 462 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 CARFQ8N187 725 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 ELOA3Q8NG57 546 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 ASB13Q8WXK3 278 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 LMF1Q96S06 567 aa15.27■□□□□ 0.04
FOXA1-201ENST00000250448 A0A1B0GX78 115 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 H7C1C5 153 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 YKT6O15498 198 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 APEHP13798 732 aaKnown RBP15.27■□□□□ 0.03
FOXA1-201ENST00000250448 SDHAP31040 664 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 POU3F4P49335 361 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 LCN6P62502 163 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 IGLV3-21P80748 117 aaPredicted RBP15.27■□□□□ 0.03
FOXA1-201ENST00000250448 ZNF74Q16587 644 aa15.27■□□□□ 0.03
FOXA1-201ENST00000250448 ODF4Q2M2E3 257 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms