RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZNF454Q8N9F8 522 aa20.77■□□□□ 0.92
SYNGR3-201ENST00000248121 OR52N5Q8NH56 324 aa20.77■□□□□ 0.92
SYNGR3-201ENST00000248121 SETD6Q8TBK2 473 aa20.77■□□□□ 0.92
SYNGR3-201ENST00000248121 TRMT10AQ8TBZ6 339 aaKnown RBP20.77■□□□□ 0.92
SYNGR3-201ENST00000248121 ST7LQ8TDW4 575 aa20.77■□□□□ 0.92
SYNGR3-201ENST00000248121 LOC102725191A0A1B0GVB3 256 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 TMEM212A6NML5 194 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 FAM25AB3EWG3 89 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 FAM25CB3EWG5 89 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 FAM25GB3EWG6 89 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 CNR1P21554 472 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 CASRP41180 1078 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 B3GALT5-AS1P59052 145 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 IL18Q14116 193 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 TAB1Q15750 504 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 ODF4Q2M2E3 257 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 OR7E24Q6IFN5 339 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 LRRC28Q86X40 367 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 LINC00346Q8IVM7 164 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 PPP1R14AQ96A00 147 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 SLC25A44Q96H78 314 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 ABI3Q9P2A4 366 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 EXTL2Q9UBQ6 330 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 ADAM30Q9UKF2 790 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 LRP12Q9Y561 859 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 ZNF254O75437 659 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 ZNF17P17021 662 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 RFX2P48378 723 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 SOX2P48431 317 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 CCL11P51671 97 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 MFGE8Q08431 387 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 CCBE1Q6UXH8 406 aaPredicted RBP20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 KRT77Q7Z794 578 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 NOXO1Q8NFA2 376 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 FDCSPQ8NFU4 85 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 OR2M7Q8NG81 312 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 NEURL2Q9BR09 285 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 KLHL9Q9P2J3 617 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 SLC22A13Q9Y226 551 aa20.76■□□□□ 0.91
SYNGR3-201ENST00000248121 TNRC6AQ8NDV7 1962 aaKnown RBP20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 H0YC42 278 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 HRGP04196 525 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 SNRPBP14678 240 aaKnown RBP20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 ZNF823P16415 610 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 NPR2P20594 1047 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 PTBP1P26599 531 aaKnown RBP eCLIP20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 CD97P48960 835 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 RASGEF1BQ0VAM2 473 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 KCTD18Q6PI47 426 aaPredicted RBP20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 DCXRQ7Z4W1 244 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 ZNF554Q86TJ5 538 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 SULF2Q8IWU5 870 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 ZNF676Q8N7Q3 588 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 MDS2Q8NDY4 140 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 OR4M1Q8NGD0 313 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 OR6X1Q8NH79 312 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 AGAP4Q96P64 663 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 RBP7Q96R05 134 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 WASF3Q9UPY6 502 aa20.75■□□□□ 0.91
SYNGR3-201ENST00000248121 ANKRD61A6NGH8 418 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 H3BSH0 61 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 RRADP55042 308 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 MFAP5Q13361 173 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 DEFB109BQ30KR1 87 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 THEM4Q5T1C6 240 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 NRARPQ7Z6K4 114 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 GLB1L2Q8IW92 636 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 Q8N402 240 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 DTX3Q8N9I9 347 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 IL17RDQ8NFM7 739 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 C11orf40Q8WZ69 217 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 PPP1R14BQ96C90 147 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 TRBV5-7A0A0A0MS05 114 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 A0A0G2JMP0 313 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 A0A0X1KG70 313 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 A0A1B0GVC2 190 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 LINC00854A0A1B0GVQ3 168 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 A6NIN4 97 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 SRSF10O75494 262 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 AQP8O94778 261 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 IGHG1P01857 330 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 ZNF43P17038 809 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 SRD5A2P31213 254 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 CCR9P51686 369 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 SCN1BQ07699 218 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 CORO6Q6QEF8 472 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 OR4M2Q8NGB6 313 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 COMMD4Q9H0A8 199 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 FBXL3Q9UKT7 428 aa20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 PHF3Q92576 2039 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-201ENST00000248121 A0A0J9YW62 118 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 CELA3AP09093 270 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 ADRA2CP18825 462 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 RIDAP52758 137 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 SOX8P57073 446 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 CLRN1P58418 232 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 RAC1P63000 192 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 HIST3H3Q16695 136 aa20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 WIPI1Q5MNZ9 446 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-201ENST00000248121 CARD17Q5XLA6 110 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms