RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZNF2Q9BSG1 426 aaPredicted RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 CALHM2Q9HA72 323 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 HSF4Q9ULV5 492 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 RAB40ALP0C0E4 278 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TEAD1P28347 426 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 CCR9P51686 369 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 LIM2P55344 173 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ALKBH1Q13686 389 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 LINC00303Q3SY05 128 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 OR51E1Q8TCB6 317 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 RAB40AQ8WXH6 277 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SLC25A32Q9H2D1 315 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 NDUFB11Q9NX14 153 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 A0A1W2PNV4 684 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ZAR1LA6NP61 321 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TMPRSS11DO60235 418 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ARG1P05089 322 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 FPR3P25089 353 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 APLNRP35414 380 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 PRPS1P60891 318 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 CD276Q5ZPR3 534 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 MED25Q71SY5 747 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 CMTM1Q8IZ96 169 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TBC1D20Q96BZ9 403 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SPNS1Q9H2V7 528 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 A4GALTQ9NPC4 353 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SH2D5Q6ZV89 423 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 OR2W3Q7Z3T1 314 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TMEM37Q8WXS4 190 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 LYSMD1Q96S90 227 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 NIPSNAP3BQ9BS92 247 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TRAF4Q9BUZ4 470 aaPredicted RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 TDRD6O60522 2096 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 GRPP07492 148 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 C20orf196Q8IYI0 205 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TRMT61AQ96FX7 289 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 CLSTN3Q9BQT9 956 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 C1QTNF3Q9BXJ4 246 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 DNAJC5Q9H3Z4 198 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 HHLA2Q9UM44 414 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TRDV1A0A1B0GX56 115 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 GPR171O14626 319 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 LALBAP00709 142 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 PIPP12273 146 aaPredicted RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 TAAR8Q969N4 342 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TEAD3Q99594 435 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 INSL6Q9Y581 213 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TRHRP34981 398 aaPredicted RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 GLO1Q04760 184 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ALKBH6Q3KRA9 238 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 GABRG1Q8N1C3 465 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ZNF596Q8TC21 504 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 KLHL42Q9P2K6 505 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 FCMRO60667 390 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 CXCL3P19876 107 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ETFBKMTQ8IXQ9 262 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 LAMP3Q9UQV4 416 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 PTRH2Q9Y3E5 179 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 M0QZQ0 153 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 SOD1P00441 154 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 ZNF468Q5VIY5 522 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 MAML2Q8IZL2 1156 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 DMBX1Q8NFW5 382 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 OR10D4PQ8NGN7 298 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CHST6Q9GZX3 395 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 SLC39A9Q9NUM3 307 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 C19orf25Q9UFG5 118 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 GPR85P60893 370 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 LRIF1Q5T3J3 769 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 OR9K2Q8NGE7 335 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 RNF224P0DH78 156 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 NPPBP16860 134 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 ERVK-16P61578 105 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 GNB1P62873 340 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 KCNIP4Q6PIL6 250 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 FAM71CQ8NEG0 241 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 OR10A5Q9H207 317 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 C12orf49Q9H741 205 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 OR6C68A6NDL8 312 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 MAN2B1O00754 1011 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 Q499Y3 187 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 WBP2NLQ6ICG8 309 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 BTF3L4Q96K17 158 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 C10orf90Q96M02 699 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 KCNJ15Q99712 375 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TMED7-TICAM2A0A0A6YYA0 188 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 P2RX6O15547 441 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 OR2F2O95006 317 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 MFGE8Q08431 387 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 MLC1Q15049 377 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 AARDQ4LEZ3 155 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 ADGRE4PQ86SQ3 457 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 KCTD12Q96CX2 325 aaKnown RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 TMED7Q9Y3B3 224 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 MRPS14O60783 128 aaKnown RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 HRH1P35367 487 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms